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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 36ChIP-seq
  • 4WGBS
  • 3ATAC-seq
  • 3total RNA-seq
  • 2pCHi-C
  • 1RNA microarray
Assay category
  • 36DNA binding
  • 4DNA methylation
  • 3DNA accessibility
  • 3Transcription
Target of assay
  • 31histone
  • 31histone modification
  • 20broad histone mark
  • 11narrow histone mark
  • 5control
Date released
  • 40August, 2017
  • 2February, 2020
  • 1August, 2018
  • 1August, 2021
  • 1February, 2023
  • 1January, 2018
  • 1March, 2020
  • 1May, 2023
  • 1October, 2019
Available data
  • bam
  • 425bigWig
  • 401tsv
  • 44fastq
  • 13bed narrowPeak
  • 10bigBed narrowPeak
  • 8tagAlign
  • 6bed bed3+
  • 3bed broadPeak
  • 2bed bedMethyl
  • 2bigBed bedMethyl
  • 2bigBed broadPeak
  • 1bedpe bed3+
Organism
  • 48Homo sapiens
Biosample type
  • 48tissue
  • 1in vitro differentiated cells
Organ
  • 257pancreas
  • 210kidney
  • 207epithelium
  • 182heart
  • 110liver
  • 93bone element
  • 91connective tissue
  • 54eye
  • 51vasculature
  • 50blood vessel
  • 49adipose tissue
  • 43brain
  • 39artery
  • 39musculature of body
  • 20lung
  • 9blood
  • 9bodily fluid
  • 8limb
  • 8skeleton
  • 5gonad
  • 5ovary
  • 2intestine
  • 2thymus
  • 2vein
  • 1adrenal gland
  • 1bone marrow
  • 1embryo
  • 1esophagus
  • 1large intestine
  • 1lymph node
  • 1mammary gland
  • 1nerve
  • 1pericardium
  • 1pituitary gland
  • 1skin of body
  • 1small intestine
  • 1spinal cord
  • 1spleen
  • 1stomach
  • 1urinary bladder
Project
  • 49AMP
Genome assembly (visualization)
  • 5hg19
  • 1GRCh38
Lab
  • 49AMP-T2D consortium
files.file_type!
  • bam
BIOSAMPLE
ASSAY

49 results

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Clear Filters
ChIP-seq
WGBS
ATAC-seq
total RNA-seq
pCHi-C
RNA microarray
tissue
subcutaneous abdominal adipose tissue363
adipose tissue1311
subcutaneous adipose tissue11
omental fat pad1
in vitro differentiated cells
white fat cell1
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