Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
122
target gene predictions
104
candidate regulatory elements
77
accessible chromatin
62
chromatin state
50
binding sites
49
gene expression
33
differential activity
30
histone modifications
18
eQTL
11
variant allelic effects
5
Fine-mapped variants
2
sQTL
2
variant to gene
Date released
167
September, 2022
119
February, 2021
53
February, 2024
47
March, 2023
38
May, 2021
22
November, 2021
20
January, 2021
19
October, 2022
17
June, 2020
10
August, 2021
10
March, 2020
7
August, 2018
6
August, 2017
6
May, 2020
6
October, 2019
5
January, 2022
4
January, 2020
2
February, 2020
2
November, 2019
1
April, 2019
1
February, 2023
1
January, 2018
1
June, 2021
1
March, 2024
Available data
404
bed bed3+
77
tsv
59
bigWig
55
bed bed9
14
bigBed narrowPeak
bam
3
bed gappedPeak
3
csv
3
xls
2
bigBed bed9
Organism
565
Homo sapiens
Biosample type
229
cell line
197
tissue
136
primary cell
3
in vitro differentiated cells
Organ
956
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
274
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
157
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
521
AMP
22
ENCODE
20
T1D
2
community
Genome assembly (visualization)
472
hg19
136
GRCh38
files.file_type!
bam
BIOSAMPLE
TYPE
565 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
accessible chromatin
chromatin state
binding sites
gene expression
differential activity
histone modifications
eQTL
variant allelic effects
Fine-mapped variants
sQTL
variant to gene
cell line
K562
23
7
1
7
2
1
EndoC_BH1
1
8
8
3
1
GM12878
8
2
1
2
2
1
GM06990
1
2
1
1
2
1
GM19240
2
1
1
1
2
1
+ See 29 more…
tissue
small intestine
17
29
1
15
1
islet of Langerhans
1
6
3
2
11
1
13
1
2
2
2
body of pancreas
5
8
4
2
1
1
3
pancreas
5
5
5
3
1
1
1
1
endocrine pancreas
4
7
4
+ See 11 more…
primary cell
pancreatic ductal cell
3
6
1
3
3
2
1
pancreatic beta cell
3
7
3
3
1
pancreatic acinar cell
3
6
3
3
1
pancreatic alpha cell
3
6
3
3
1
pancreatic delta cell
4
4
3
3
1
+ See 16 more…
in vitro differentiated cells
pancreatic ductal cell
3
See all biosamples
Download