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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
snATAC-seq
1
ATAC-seq
1
pCHi-C
Assay category
9
DNA accessibility
Date released
8
January, 2021
1
January, 2018
1
March, 2020
Available data
bam
80
fastq
67
bigWig
64
bed narrowPeak
63
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
tsv
Organism
10
Homo sapiens
Biosample type
8
primary cell
1
cell line
1
tissue
Organ
249
pancreas
210
kidney
207
epithelium
162
heart
97
liver
93
bone element
63
connective tissue
54
eye
51
vasculature
50
blood vessel
39
artery
34
brain
29
adipose tissue
27
musculature of body
20
lung
9
blood
9
bodily fluid
8
limb
8
skeleton
5
gonad
5
ovary
2
intestine
2
thymus
2
vein
1
adrenal gland
1
bone marrow
1
embryo
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
nerve
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
spleen
1
stomach
1
urinary bladder
Project
8
T1D
2
AMP
Genome assembly (visualization)
1
hg19
Lab
8
Kyle Gaulton, UCSD
2
AMP-T2D consortium
files.file_type!
bam
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
10 results
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Clear Filters
snATAC-seq
ATAC-seq
pCHi-C
primary cell
peripheral blood mononuclear cell
8
cell line
GM12878
1
tissue
spleen
1
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