Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 84RNA microarray
  • 4ATAC-seq
  • 4total RNA-seq
  • 1pCHi-C
Assay category
  • 4DNA accessibility
  • 4Transcription
Date released
  • 84February, 2021
  • 8February, 2023
  • 1May, 2021
Available data
  • 88txt
  • bam
  • 58bigWig
  • 58tsv
  • 8bed narrowPeak
  • 4bed bed3
Organism
  • 93Homo sapiens
Biosample type
  • 92tissue
  • 1primary cell
Organ
  • 257pancreas
  • 210kidney
  • 207epithelium
  • 182heart
  • 110liver
  • 93bone element
  • 91connective tissue
  • 54eye
  • 51vasculature
  • 50blood vessel
  • 49adipose tissue
  • 43brain
  • 39artery
  • 39musculature of body
  • 20lung
  • 9blood
  • 9bodily fluid
  • 8limb
  • 8skeleton
  • 5gonad
  • 5ovary
  • 2intestine
  • 2thymus
  • 2vein
  • 1adrenal gland
  • 1bone marrow
  • 1embryo
  • 1esophagus
  • 1large intestine
  • 1lymph node
  • 1mammary gland
  • 1nerve
  • 1pericardium
  • 1pituitary gland
  • 1skin of body
  • 1small intestine
  • 1spinal cord
  • 1spleen
  • 1stomach
  • 1urinary bladder
Project
  • 92AMP
  • 1T1D
Genome assembly (visualization)
  • 4hg19
Lab
  • 92AMP-T2D consortium
  • 1Kyle Gaulton, UCSD
Audit category:
  • 84inconsistent ontology term
files.file_type!
  • bam
BIOSAMPLE
ASSAY

93 results

search-icontable-tab-icon
Clear Filters
RNA microarray
ATAC-seq
total RNA-seq
pCHi-C
tissue
bone element84
acetabular part of hip bone11
ilium11
ischium11
pubis11
primary cell
megakaryocyte1
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego