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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 28ATAC-seq
  • 19total RNA-seq
  • 4pCHi-C
  • 2ChIP-seq
  • 1RRBS
Assay category
  • 28DNA accessibility
  • 19Transcription
  • 2DNA binding
  • 1DNA methylation
Target of assay
  • 2histone
  • 2histone modification
  • 2narrow histone mark
Date released
  • 31February, 2023
  • 21October, 2019
  • 1February, 2020
  • 1July, 2019
Available data
  • 33bed narrowPeak
  • bam
  • 6bigBed narrowPeak
  • 6bigWig
  • 5tsv
  • 4bed bed3+
  • 4bed broadPeak
  • 4bigBed broadPeak
  • 1bed bedMethyl
  • 1bigBed bedMethyl
Organism
  • 54Homo sapiens
Biosample type
  • 53tissue
  • 1primary cell
Organ
  • 257pancreas
  • 210kidney
  • 207epithelium
  • 182heart
  • 110liver
  • 93bone element
  • 91connective tissue
  • 54eye
  • 51vasculature
  • 50blood vessel
  • 49adipose tissue
  • 43brain
  • 39artery
  • 39musculature of body
  • 20lung
  • 9blood
  • 9bodily fluid
  • 8limb
  • 8skeleton
  • 5gonad
  • 5ovary
  • 2intestine
  • 2thymus
  • 2vein
  • 1adrenal gland
  • 1bone marrow
  • 1embryo
  • 1esophagus
  • 1large intestine
  • 1lymph node
  • 1mammary gland
  • 1nerve
  • 1pericardium
  • 1pituitary gland
  • 1skin of body
  • 1small intestine
  • 1spinal cord
  • 1spleen
  • 1stomach
  • 1urinary bladder
Project
  • 54AMP
Genome assembly (visualization)
  • 28hg19
Lab
  • 54AMP-T2D consortium
files.file_type!
  • bam
BIOSAMPLE
ASSAY

54 results

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Clear Filters
ATAC-seq
total RNA-seq
pCHi-C
ChIP-seq
RRBS
tissue
islet of Langerhans11442
retina153
pigmented layer of retina122
primary cell
retinal pigment epithelial cell1
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