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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 93single cell RNA-seq
  • 41ChIP-seq
  • 35ATAC-seq
  • 3Hi-C
  • 3pCHi-C
  • 3total RNA-seq
  • 2RRBS
  • 2WGBS
Assay category
  • 96Transcription
  • 41DNA binding
  • 35DNA accessibility
  • 4DNA methylation
  • 33D chromatin structure
Target of assay
  • 36histone
  • 36histone modification
  • 20broad histone mark
  • 16narrow histone mark
  • 5RNA binding protein
  • 5transcription factor
Date released
  • 92August, 2021
  • 40May, 2024
  • 36February, 2023
  • 5March, 2020
  • 4July, 2019
  • 3February, 2020
  • 1April, 2019
  • 1October, 2019
Available data
  • 224bigWig
  • bam
  • 191bed narrowPeak
  • 168tsv
  • 94bigBed narrowPeak
  • 30bed bed3+
  • 30bed broadPeak
  • 30bigBed broadPeak
  • 8bed bedMethyl
  • 8bigBed bedMethyl
  • 6tagAlign
  • 3bedpe bed3+
  • 3hic
Organism
  • 182Homo sapiens
Biosample type
  • 181tissue
  • 1primary cell
Organ
  • 257pancreas
  • 210kidney
  • 207epithelium
  • 182heart
  • 110liver
  • 93bone element
  • 91connective tissue
  • 54eye
  • 51vasculature
  • 50blood vessel
  • 49adipose tissue
  • 43brain
  • 39artery
  • 39musculature of body
  • 20lung
  • 9blood
  • 9bodily fluid
  • 8limb
  • 8skeleton
  • 5gonad
  • 5ovary
  • 2intestine
  • 2thymus
  • 2vein
  • 1adrenal gland
  • 1bone marrow
  • 1embryo
  • 1esophagus
  • 1large intestine
  • 1lymph node
  • 1mammary gland
  • 1nerve
  • 1pericardium
  • 1pituitary gland
  • 1skin of body
  • 1small intestine
  • 1spinal cord
  • 1spleen
  • 1stomach
  • 1urinary bladder
Project
  • 182AMP
Genome assembly (visualization)
  • 75GRCh38
  • 6hg19
Lab
  • 142AMP-T2D consortium
  • 40Patrick T. Ellinor, Broad
Audit category:
  • 1inconsistent ontology term
files.file_type!
  • bam
BIOSAMPLE
ASSAY

182 results

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Clear Filters
single cell RNA-seq
ChIP-seq
ATAC-seq
Hi-C
pCHi-C
total RNA-seq
RRBS
WGBS
tissue
left cardiac atrium1840
coronary artery351
heart left ventricle1811112
heart right ventricle1711
right cardiac atrium181
primary cell
cardiac fibroblast1
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