Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
73
target gene predictions
29
candidate regulatory elements
14
chromatin state
8
accessible chromatin
5
gene expression
4
binding sites
3
eQTL
2
histone modifications
1
variant allelic effects
Date released
52
February, 2024
42
September, 2022
20
February, 2021
6
November, 2021
5
June, 2020
5
March, 2024
4
May, 2021
3
January, 2022
1
March, 2020
1
October, 2022
Available data
117
bed bed3+
14
bed bed9
5
tsv
3
bigWig
Organism
139
Homo sapiens
Biosample type
65
cell line
64
tissue
10
primary cell
Organ
956
epithelium
652
kidney
468
connective tissue
466
brain
375
musculature of body
311
lung
289
intestine
274
pancreas
269
vasculature
257
heart
244
limb
218
bodily fluid
215
embryo
207
blood
204
blood vessel
204
skin of body
174
large intestine
157
liver
146
extraembryonic component
119
stomach
109
eye
89
adipose tissue
89
bone element
87
mammary gland
84
small intestine
83
uterus
78
prostate gland
75
artery
73
adrenal gland
73
placenta
64
penis
64
ureter
62
lymph node
50
gonad
49
thymus
45
esophagus
43
spinal cord
34
spleen
26
testis
25
nerve
24
lymphatic vessel
24
lymphoid tissue
23
ovary
23
thyroid gland
23
vein
19
mouth
18
skeleton
16
bronchus
13
bone marrow
13
breast
13
pituitary gland
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
133
AMP
6
ENCODE
Genome assembly (visualization)
131
hg19
74
GRCh38
files.file_type!
bam
BIOSAMPLE
TYPE
139 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
chromatin state
accessible chromatin
gene expression
binding sites
eQTL
histone modifications
variant allelic effects
cell line
HeLa-S3
55
5
3
1
Ishikawa
1
tissue
ovary
6
8
4
1
1
1
thyroid gland
5
8
4
1
1
tongue
2
4
2
1
uterus
2
3
1
1
1
1
endometrium cancer
1
1
+ See 4 more…
primary cell
Ishikawa
1
1
1
thyroid follicular cell
1
1
1
luteal cell
1
1
uterine smooth muscle cell
1
1
See all biosamples
Download