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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 35ATAC-seq
  • 6single cell RNA-seq
  • 5Hi-C
  • 3total RNA-seq
  • 1RRBS
  • 1pCHi-C
Assay category
  • 35DNA accessibility
  • 9Transcription
  • 53D chromatin structure
  • 1DNA methylation
Date released
  • 35February, 2023
  • 6August, 2021
  • 3February, 2020
  • 3July, 2019
  • 3March, 2020
  • 1October, 2019
Available data
  • bam
  • 155bigWig
  • 133bed narrowPeak
  • 83bigBed narrowPeak
  • 68tsv
  • 17bed broadPeak
  • 17bigBed broadPeak
  • 13bed bed3+
  • 6fastq
  • 6tagAlign
  • 3hic
  • 2bed bedMethyl
  • 2bedpe bed3+
  • 2bigBed bedMethyl
  • 2hdf5
  • 1tar
Organism
  • 51Homo sapiens
Biosample type
  • 46tissue
  • 5primary cell
Organ
  • 257pancreas
  • 210kidney
  • 207epithelium
  • 182heart
  • 110liver
  • 93bone element
  • 91connective tissue
  • 54eye
  • 51vasculature
  • 50blood vessel
  • 49adipose tissue
  • 43brain
  • 39artery
  • 39musculature of body
  • 20lung
  • 9blood
  • 9bodily fluid
  • 8limb
  • 8skeleton
  • 5gonad
  • 5ovary
  • 2intestine
  • 2thymus
  • 2vein
  • 1adrenal gland
  • 1bone marrow
  • 1embryo
  • 1esophagus
  • 1large intestine
  • 1lymph node
  • 1mammary gland
  • 1nerve
  • 1pericardium
  • 1pituitary gland
  • 1skin of body
  • 1small intestine
  • 1spinal cord
  • 1spleen
  • 1stomach
  • 1urinary bladder
Project
  • 51AMP
Genome assembly (visualization)
  • 35GRCh38
  • 6hg19
Lab
  • 51AMP-T2D consortium
Audit category:
  • 1audit script error
files.file_type!
  • bam
BIOSAMPLE
ASSAY

51 results

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Clear Filters
ATAC-seq
single cell RNA-seq
Hi-C
total RNA-seq
RRBS
pCHi-C
tissue
coronary artery351
aorta411
pulmonary artery2
ascending aorta1
tibial artery1
primary cell
endothelial cell of umbilical vein2
brain microvascular endothelial cell1
choroid plexus epithelial cell1
endothelial cell of hepatic sinusoid1
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