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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 263single cell RNA-seq
  • 245total RNA-seq
  • 86RNA microarray
  • 10MeRIP-seq
  • 5STARR-seq
  • 3snDrop-seq
Assay category
  • 508Transcription
Target of assay
  • 5control
  • 5nucleotide modification
Date released
  • 170August, 2021
  • 105February, 2021
  • 94February, 2023
  • 56September, 2020
  • 54May, 2022
  • 47September, 2023
  • 25February, 2020
  • 14October, 2019
  • 10November, 2020
  • 9April, 2020
  • 9May, 2021
  • 5December, 2019
  • 4July, 2018
  • 4May, 2023
  • 2March, 2020
  • 2May, 2020
  • 1November, 2018
  • 1September, 2018
Available data
  • 1478tsv
  • bam
  • 1331bigWig
  • 366fastq
  • 156txt
  • 52zippedFastqFolder
  • 8csv
  • 2bed bed3+
Organism
  • 612Homo sapiens
Biosample type
  • 397tissue
  • 184primary cell
  • 20cell line
  • 11in vitro differentiated cells
Organ
  • 120kidney
  • 96heart
  • 88bone element
  • 77pancreas
  • 62epithelium
  • 33liver
  • 19eye
  • 12brain
  • 9blood vessel
  • 9lung
  • 9vasculature
  • 7connective tissue
  • 4artery
  • 4skeleton
  • 3adipose tissue
  • 3limb
  • 3musculature of body
  • 1nerve
  • 1spinal cord
Project
  • 372AMP
  • 177HPAP
  • 47KPMP
  • 9LungMap
  • 7T1D
Genome assembly (visualization)
  • 3hg19
  • 1GRCh38
Lab
  • 261AMP-T2D consortium
  • 177Klaus Kaestner, Upenn
  • 60Katalin Susztak, Upenn
  • 47KPMP
  • 20Karen Mohlke, UNC
  • 15Bing Ren, UCSD
  • 13Kyle Gaulton, UCSD
  • 10Rohit N. Kulkarni, M.D., Ph.D.
  • 9Xin Sun, UCSD
Audit category:
  • 96inconsistent ontology term
  • 9audit script error
files.file_type!
  • bam
BIOSAMPLE
ASSAY

612 results

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Clear Filters
single cell RNA-seq
total RNA-seq
RNA microarray
MeRIP-seq
STARR-seq
snDrop-seq
tissue
kidney6449
bone element84
islet of Langerhans264
liver120
heart left ventricle18
primary cell
Langerhans cell85
pancreatic alpha cell42
exocrine cell39
pancreatic beta cell11
CD8-positive, alpha-beta T cell2
cell line
HepG292
EndoC_BH16
HEK293T2
Synthesized DNA1
in vitro differentiated cells
embryonic stem cell5
cardiomyocytes (cardiac muscle cell)2
immature adipocyte2
adipocyte1
preadipocyte1
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