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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 123ChIP-seq
Assay category
  • 123DNA binding
Target of assay
  • 232histone
  • 232histone modification
  • 123broad histone mark
  • 109narrow histone mark
  • 37control
  • 29transcription factor
  • 11RNA binding protein
  • 5nucleotide modification
Date released
  • 60August, 2017
  • 32May, 2021
  • 20May, 2024
  • 5October, 2017
  • 4November, 2017
  • 2August, 2021
Available data
  • 427bigWig
  • 420bed narrowPeak
  • bam
  • 242bigBed narrowPeak
  • 147tagAlign
  • 118fastq
  • 36bed broadPeak
  • 16bigBed broadPeak
  • 12bed bed3+
Organism
  • 123Homo sapiens
Biosample type
  • 81tissue
  • 22primary cell
  • 19in vitro differentiated cells
  • 1cell line
Organ
  • 28connective tissue
  • 20adipose tissue
  • 20heart
  • 13liver
  • 12musculature of body
  • 9brain
  • 8pancreas
Project
  • 123AMP
Genome assembly (visualization)
  • 33hg19
  • 20GRCh38
Lab
  • 72AMP-T2D consortium
  • 30Kyle Gaulton, UCSD
  • 20Patrick T. Ellinor, Broad
  • 1Bing Ren, UCSD
Audit category:
  • 1missing controlled_by
files.file_type!
  • bam
BIOSAMPLE
ASSAY

123 results

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Clear Filters
ChIP-seq
tissue
left cardiac atrium20
subcutaneous abdominal adipose tissue20
liver12
skeletal muscle tissue12
islet of Langerhans8
primary cell
CD8-positive, alpha-beta T cell20
naive thymus-derived CD4-positive, alpha-beta T cell1
neutrophil1
in vitro differentiated cells
embryonic stem cell10
adipocyte8
neural progenitor cell1
cell line
HepG21
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