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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 32ChIP-seq
  • 5MeRIP-seq
Assay category
  • 32DNA binding
Target of assay
  • 232histone
  • 232histone modification
  • 123broad histone mark
  • 109narrow histone mark
  • 37control
  • 29transcription factor
  • 11RNA binding protein
  • 5nucleotide modification
Date released
  • 19August, 2017
  • 8May, 2021
  • 5November, 2020
  • 4August, 2021
  • 1October, 2017
Available data
  • bam
  • 168fastq
  • 68tagAlign
  • 23bigWig
  • 9bed bed3+
  • 3tsv
Organism
  • 37Homo sapiens
Biosample type
  • 20tissue
  • 7cell line
  • 7in vitro differentiated cells
  • 3primary cell
Organ
  • 11pancreas
  • 7connective tissue
  • 7liver
  • 5adipose tissue
  • 3epithelium
  • 3musculature of body
  • 1brain
Project
  • 37AMP
Genome assembly (visualization)
  • 3hg19
Lab
  • 20AMP-T2D consortium
  • 8Kyle Gaulton, UCSD
  • 5Rohit N. Kulkarni, M.D., Ph.D.
  • 4Bing Ren, UCSD
Audit category:
  • 3inconsistent ontology term
files.file_type!
  • bam
BIOSAMPLE
ASSAY

37 results

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Clear Filters
ChIP-seq
MeRIP-seq
tissue
islet of Langerhans62
subcutaneous abdominal adipose tissue5
liver3
skeletal muscle tissue3
brain1
cell line
HepG24
EndoC_BH13
in vitro differentiated cells
embryonic stem cell5
adipocyte2
primary cell
CD8-positive, alpha-beta T cell3
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