Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 232ChIP-seq
Assay category
  • 232DNA binding
Target of assay
  • 232histone
  • 232histone modification
  • 123broad histone mark
  • 109narrow histone mark
  • 37control
  • 29transcription factor
  • 11RNA binding protein
  • 5nucleotide modification
Date released
  • 96August, 2017
  • 54May, 2021
  • 35May, 2024
  • 23October, 2019
  • 13November, 2017
  • 6October, 2017
  • 4August, 2021
  • 1April, 2019
Available data
  • 869bigWig
  • 851bed narrowPeak
  • bam
  • 391bigBed narrowPeak
  • 321tagAlign
  • 230fastq
  • 65bed broadPeak
  • 30bigBed broadPeak
  • 25bed bed3+
  • 1tagAlign bed3+
Organism
  • 232Homo sapiens
Biosample type
  • 162tissue
  • 34primary cell
  • 33in vitro differentiated cells
  • 3cell line
Organ
  • 44connective tissue
  • 36heart
  • 31adipose tissue
  • 23liver
  • 21brain
  • 19musculature of body
  • 14pancreas
  • 4gonad
  • 4ovary
  • 2eye
  • 1limb
  • 1lymph node
Project
  • 232AMP
Genome assembly (visualization)
  • 57hg19
  • 37GRCh38
Lab
  • 144AMP-T2D consortium
  • 50Kyle Gaulton, UCSD
  • 35Patrick T. Ellinor, Broad
  • 3Bing Ren, UCSD
Audit category:
  • 1missing controlled_by
files.file_type!
  • bam
BIOSAMPLE
ASSAY

232 results

search-icontable-tab-icon
Clear Filters
ChIP-seq
tissue
islet of Langerhans35
left cardiac atrium35
subcutaneous abdominal adipose tissue31
liver20
skeletal muscle tissue19
primary cell
CD8-positive, alpha-beta T cell30
naive thymus-derived CD4-positive, alpha-beta T cell2
monocyte1
neutrophil1
in vitro differentiated cells
embryonic stem cell20
adipocyte12
neural progenitor cell1
cell line
HepG23
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego