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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 109ChIP-seq
Assay category
  • 109DNA binding
Target of assay
  • 232histone
  • 232histone modification
  • 123broad histone mark
  • 109narrow histone mark
  • 37control
  • 29transcription factor
  • 11RNA binding protein
  • 5nucleotide modification
Date released
  • 36August, 2017
  • 23October, 2019
  • 22May, 2021
  • 15May, 2024
  • 9November, 2017
  • 2August, 2021
  • 1April, 2019
  • 1October, 2017
Available data
  • 440bigWig
  • 429bed narrowPeak
  • bam
  • 174tagAlign
  • 149bigBed narrowPeak
  • 110fastq
  • 29bed broadPeak
  • 14bigBed broadPeak
  • 13bed bed3+
  • 1tagAlign bed3+
Organism
  • 109Homo sapiens
Biosample type
  • 81tissue
  • 14in vitro differentiated cells
  • 12primary cell
  • 2cell line
Organ
  • 16connective tissue
  • 16heart
  • 12brain
  • 11adipose tissue
  • 10liver
  • 7musculature of body
  • 6pancreas
  • 4gonad
  • 4ovary
  • 2eye
  • 1limb
  • 1lymph node
Project
  • 109AMP
Genome assembly (visualization)
  • 24hg19
  • 17GRCh38
Lab
  • 72AMP-T2D consortium
  • 20Kyle Gaulton, UCSD
  • 15Patrick T. Ellinor, Broad
  • 2Bing Ren, UCSD
files.file_type!
  • bam
BIOSAMPLE
ASSAY

109 results

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Clear Filters
ChIP-seq
tissue
islet of Langerhans27
left cardiac atrium15
subcutaneous abdominal adipose tissue11
liver8
skeletal muscle tissue7
in vitro differentiated cells
embryonic stem cell10
adipocyte4
primary cell
CD8-positive, alpha-beta T cell10
monocyte1
naive thymus-derived CD4-positive, alpha-beta T cell1
cell line
HepG22
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