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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
26
total RNA-seq
17
ChIP-seq
14
ATAC-seq
1
single cell RNA-seq
Assay category
27
Transcription
17
DNA binding
14
DNA accessibility
Target of assay
32
histone
32
histone modification
17
broad histone mark
narrow histone mark
Date released
713
February, 2021
368
November, 2017
333
May, 2021
314
May, 2020
305
August, 2021
290
August, 2017
201
February, 2023
199
May, 2022
168
July, 2018
165
October, 2019
86
May, 2019
81
July, 2019
72
November, 2018
68
December, 2017
65
October, 2018
61
March, 2020
59
September, 2020
58
September, 2018
57
April, 2019
57
November, 2019
49
April, 2018
47
September, 2023
35
December, 2018
31
February, 2018
27
January, 2019
25
February, 2020
25
May, 2024
21
October, 2017
20
June, 2019
19
April, 2020
16
January, 2021
15
May, 2023
15
November, 2020
10
December, 2019
9
September, 2017
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
58
fastq
57
bam
57
bigWig
31
bed narrowPeak
26
tsv
14
bigBed narrowPeak
1
csv
Organism
58
Homo sapiens
Biosample type
58
primary cell
Organ
57
pancreas
50
epithelium
Project
58
AMP
Genome assembly (visualization)
57
GRCh38
57
hg19
Lab
58
AMP-T2D consortium
Audit category:
17
missing controlled_by
files.file_type!
bed bed3+
bed bedMethyl
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
58 results
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total RNA-seq
ChIP-seq
ATAC-seq
single cell RNA-seq
primary cell
pancreatic beta cell
10
4
pancreatic ductal cell
4
6
4
pancreatic alpha cell
10
3
pancreatic acinar cell
2
4
3
pancreatic endocrine cell
7
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