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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
5
total RNA-seq
4
RRBS
1
FAIRE-seq
1
small RNA-seq
Assay category
6
Transcription
4
DNA methylation
1
DNA accessibility
Date released
130
August, 2021
47
September, 2023
30
October, 2019
23
April, 2019
14
May, 2023
11
July, 2019
8
February, 2021
5
May, 2019
3
December, 2019
3
June, 2019
2
March, 2020
0
November, 2018
Available data
7
bam
7
bigWig
6
tsv
4
bed bedMethyl
4
bigBed bedMethyl
1
bed narrowPeak
1
bigBed narrowPeak
Organism
11
Homo sapiens
Biosample type
7
primary cell
4
tissue
Organ
59
liver
25
heart
17
connective tissue
15
blood
15
bodily fluid
15
brain
12
adipose tissue
11
epithelium
11
kidney
11
pancreas
10
musculature of body
10
vasculature
9
blood vessel
8
spleen
5
limb
3
artery
2
pericardium
1
eye
Project
11
AMP
Genome assembly (visualization)
11
hg19
6
GRCh38
Lab
11
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
files.file_type!
bed bed3+
bed bedgraph
BIOSAMPLE
ASSAY
11 results
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total RNA-seq
RRBS
FAIRE-seq
small RNA-seq
primary cell
epithelial cell of proximal tubule
1
1
kidney epithelial cell
1
1
renal cortical epithelial cell
1
1
glomerular endothelial cell
1
tissue
kidney
1
1
metanephros
1
1
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