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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
18
ChIP-seq
7
total RNA-seq
4
Hi-C
1
WGBS
Assay category
18
DNA binding
7
Transcription
4
3D chromatin structure
1
DNA methylation
Target of assay
17
control
1
histone
1
histone modification
1
narrow histone mark
Date released
21
October, 2019
5
July, 2019
3
February, 2020
1
May, 2019
Available data
80
bam
bed narrowPeak
57
bigWig
50
bigBed narrowPeak
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
7
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
30
Homo sapiens
Biosample type
30
tissue
Organ
672
pancreas
566
connective tissue
454
adipose tissue
334
epithelium
334
liver
202
heart
171
kidney
151
bone element
97
vasculature
95
blood vessel
71
brain
67
artery
31
musculature of body
30
limb
28
eye
22
embryo
20
lung
16
nerve
15
blood
15
bodily fluid
11
spleen
8
skeleton
5
gonad
5
ovary
5
vein
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
30
AMP
Genome assembly (visualization)
5
GRCh38
4
hg19
Lab
30
AMP-T2D consortium
files.file_type!
bed bed3+
bed narrowPeak
month_released!
April, 2018
target.investigated_as!
broad histone mark
BIOSAMPLE
ASSAY
30 results
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ChIP-seq
total RNA-seq
Hi-C
WGBS
tissue
tibial nerve
11
5
tibial artery
5
1
gastrocnemius medialis
1
4
muscle of leg
1
1
islet of Langerhans
1
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