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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
123
ChIP-seq
7
WGBS
6
RRBS
1
DNase-seq
Assay category
123
DNA binding
13
DNA methylation
1
DNA accessibility
Target of assay
76
histone
76
histone modification
48
broad histone mark
47
control
28
narrow histone mark
Date released
270
August, 2021
175
February, 2023
162
February, 2021
155
May, 2022
137
August, 2017
107
October, 2019
81
May, 2020
72
November, 2017
56
September, 2020
47
September, 2023
44
March, 2020
36
May, 2021
30
November, 2019
29
October, 2018
25
February, 2020
23
July, 2019
23
May, 2019
19
April, 2020
17
December, 2017
15
April, 2019
15
May, 2023
11
November, 2020
9
October, 2017
8
February, 2018
8
June, 2019
8
November, 2018
5
December, 2018
5
December, 2019
5
March, 2019
5
March, 2023
4
January, 2019
4
July, 2018
4
October, 2022
4
September, 2017
1
August, 2018
1
August, 2022
1
September, 2018
Available data
287
fastq
282
bam
bigWig
142
bed narrowPeak
89
tsv
85
tagAlign
42
bigBed narrowPeak
41
bed broadPeak
bed bed3+
15
bigBed broadPeak
6
bed bedMethyl
6
bigBed bedMethyl
Organism
136
Homo sapiens
Biosample type
105
tissue
19
in vitro differentiated cells
13
primary cell
Organ
59
connective tissue
40
adipose tissue
35
liver
29
pancreas
13
musculature of body
12
epithelium
Project
137
AMP
Genome assembly (visualization)
4
hg19
Lab
137
AMP-T2D consortium
files.file_type!
bed bed3+
bigWig
lab.title!
Kyle Gaulton, UCSD
BIOSAMPLE
ASSAY
137 results
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Clear Filters
ChIP-seq
WGBS
RRBS
DNase-seq
tissue
subcutaneous abdominal adipose tissue
35
3
liver
30
3
1
islet of Langerhans
15
skeletal muscle tissue
9
4
adipose tissue
1
1
+ See 2 more…
in vitro differentiated cells
adipocyte
19
primary cell
pancreatic alpha cell
6
pancreatic beta cell
6
skeletal muscle myoblast
1
See all biosamples
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