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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
303
ChIP-seq
Assay category
303
DNA binding
Target of assay
303
transcription factor
94
control
83
histone modification
82
histone
82
recombinant protein
54
RNA binding protein
51
narrow histone mark
31
broad histone mark
20
chromatin remodeller
2
other context
2
other post-translational modification
Date released
241
November, 2017
49
November, 2018
December, 2017
11
August, 2021
2
August, 2017
Available data
300
bigWig
296
bed narrowPeak
294
fastq
293
bam
281
bigBed narrowPeak
44
bed broadPeak
44
bigBed broadPeak
3
tar
bed bed3+
Organism
303
Homo sapiens
Biosample type
297
cell line
6
tissue
Organ
303
liver
51
blood
51
bodily fluid
30
connective tissue
17
heart
13
adipose tissue
12
pancreas
10
kidney
9
vasculature
8
blood vessel
7
epithelium
6
spleen
5
artery
3
brain
1
eye
Project
303
AMP
Genome assembly (visualization)
294
hg19
251
GRCh38
Lab
292
AMP-T2D consortium
11
Bing Ren, UCSD
Audit category:
12
missing controlled_by
Audit category:
15
inconsistent control read length
8
inconsistent control run_type
files.file_type!
bed bed3+
hdf5
month_released!
December, 2017
BIOSAMPLE
ASSAY
303 results
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ChIP-seq
cell line
HepG2
297
tissue
liver
6
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