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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
149
ChIP-seq
Assay category
149
DNA binding
Target of assay
336
transcription factor
149
histone modification
148
histone
124
control
82
recombinant protein
75
broad histone mark
73
narrow histone mark
58
RNA binding protein
23
chromatin remodeller
2
other context
2
other post-translational modification
Date released
48
October, 2019
33
August, 2017
27
May, 2020
17
December, 2017
15
November, 2017
6
May, 2019
3
August, 2021
Available data
131
bigWig
129
bed narrowPeak
128
bam
83
bigBed narrowPeak
58
tagAlign
45
fastq
14
bed broadPeak
14
bigBed broadPeak
bed bed3+
Organism
149
Homo sapiens
Biosample type
119
tissue
18
cell line
12
in vitro differentiated cells
Organ
187
brain
139
pancreas
100
liver
97
heart
90
epithelium
78
connective tissue
71
vasculature
70
blood vessel
49
limb
33
musculature of body
32
adipose tissue
30
kidney
24
nerve
20
artery
15
vein
10
embryo
6
spleen
4
gonad
4
ovary
3
eye
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
Project
149
AMP
Genome assembly (visualization)
128
hg19
114
GRCh38
Lab
146
AMP-T2D consortium
3
Bing Ren, UCSD
Audit category:
1
missing controlled_by
Audit category:
12
inconsistent control read length
files.file_type!
bed bed3+
hdf5
BIOSAMPLE
ASSAY
149 results
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Clear Filters
ChIP-seq
tissue
liver
65
tibial nerve
24
tibial artery
18
muscle of leg
6
right lobe of liver
5
+ See 1 more…
cell line
HepG2
18
in vitro differentiated cells
hepatocyte
12
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