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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
35
ChIP-seq
6
total RNA-seq
1
ATAC-seq
1
RRBS
Assay category
35
DNA binding
6
Transcription
1
DNA accessibility
1
DNA methylation
Target of assay
24
histone
24
histone modification
16
broad histone mark
11
control
8
narrow histone mark
Date released
40
October, 2019
2
July, 2019
1
February, 2020
Available data
43
bam
32
bigWig
27
bed narrowPeak
26
bigBed narrowPeak
6
tsv
bed bed3+
2
bed broadPeak
2
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
43
Homo sapiens
Biosample type
42
tissue
1
primary cell
Organ
917
pancreas
778
liver
657
connective tissue
503
epithelium
485
adipose tissue
363
heart
251
brain
229
kidney
223
vasculature
219
blood vessel
159
bone element
137
artery
86
limb
69
blood
69
bodily fluid
62
musculature of body
57
eye
41
nerve
34
embryo
24
spleen
20
lung
vein
16
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
43
AMP
Genome assembly (visualization)
31
hg19
30
GRCh38
Lab
43
AMP-T2D consortium
files.file_type!
bed bed3+
lab.title!
KPMP
organ_slims!
vein
BIOSAMPLE
ASSAY
43 results
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Clear Filters
ChIP-seq
total RNA-seq
ATAC-seq
RRBS
tissue
tibial nerve
35
5
1
pericardium
1
primary cell
pericardium fibroblast
1
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