Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
104
ChIP-seq
5
total RNA-seq
Assay category
104
DNA binding
5
Transcription
Target of assay
56
transcription factor
28
histone
28
histone modification
20
control
14
broad histone mark
14
narrow histone mark
10
RNA binding protein
9
chromatin remodeller
Date released
713
February, 2021
406
November, 2017
397
May, 2021
378
August, 2017
341
May, 2020
312
August, 2021
266
October, 2019
199
May, 2022
198
February, 2023
168
July, 2018
120
May, 2019
104
July, 2019
80
April, 2019
79
December, 2017
79
November, 2018
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
31
June, 2019
30
January, 2019
24
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
15
May, 2023
15
November, 2020
10
December, 2019
9
September, 2017
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
124
bam
124
fastq
98
bigWig
93
bed narrowPeak
71
bigBed narrowPeak
bed bed3+
5
tsv
Organism
109
Homo sapiens
Biosample type
55
tissue
31
in vitro differentiated cells
23
cell line
Organ
68
liver
19
epithelium
18
blood
18
bodily fluid
10
embryo
7
spleen
Project
109
AMP
Genome assembly (visualization)
88
GRCh38
88
hg19
Lab
109
AMP-T2D consortium
Audit category:
27
inconsistent control
4
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
5
inconsistent control read length
files.file_type!
bed bed3+
lab.title!
Struan F.A. Grant, CHOP
organ_slims!
nerve
BIOSAMPLE
ASSAY
109 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
total RNA-seq
tissue
liver
38
right lobe of liver
10
spleen
7
in vitro differentiated cells
hepatocyte
15
pancreatic endoderm
6
Hepatic endoderm
4
Posterior foregut
2
definitive endodermal cell
2
+ See 1 more…
cell line
GM12878
18
HepG2
5
See all biosamples
Download