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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
120
ChIP-seq
120
total RNA-seq
48
single cell RNA-seq
Assay category
168
Transcription
120
DNA binding
Target of assay
92
histone
92
histone modification
58
broad histone mark
34
narrow histone mark
23
control
5
RNA binding protein
5
transcription factor
Date released
713
February, 2021
406
November, 2017
397
May, 2021
378
August, 2017
341
May, 2020
312
August, 2021
266
October, 2019
199
May, 2022
198
February, 2023
168
July, 2018
120
May, 2019
104
July, 2019
80
April, 2019
79
December, 2017
79
November, 2018
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
31
June, 2019
30
January, 2019
24
February, 2020
23
October, 2017
19
April, 2020
16
January, 2021
15
May, 2023
15
November, 2020
10
December, 2019
9
September, 2017
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
284
bam
261
bigWig
164
tsv
97
bed narrowPeak
97
bigBed narrowPeak
50
fastq
Organism
288
Homo sapiens
Biosample type
235
tissue
53
primary cell
Organ
159
pancreas
50
blood vessel
50
vasculature
38
epithelium
28
brain
21
heart
7
limb
7
musculature of body
5
artery
5
kidney
2
connective tissue
Project
288
AMP
Genome assembly (visualization)
261
hg19
260
GRCh38
Lab
288
AMP-T2D consortium
Audit category:
9
inconsistent ontology term
files.file_type!
bed bed3+
lab.title!
Struan F.A. Grant, CHOP
organ_slims!
nerve
BIOSAMPLE
ASSAY
288 results
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Clear Filters
ChIP-seq
total RNA-seq
single cell RNA-seq
tissue
islet of Langerhans
120
ascending aorta
16
thoracic aorta
16
temporal lobe
15
angular gyrus
13
+ See 7 more…
primary cell
pancreatic beta cell
9
pancreatic alpha cell
7
kidney epithelial cell
5
pancreatic acinar cell
5
pancreatic delta cell
4
+ See 11 more…
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