Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
ChIP-seq
8
snATAC-seq
1
ATAC-seq
Assay category
27
DNA binding
9
DNA accessibility
Target of assay
25
transcription factor
2
RNA binding protein
2
chromatin remodeller
Date released
27
December, 2018
January, 2019
November, 2018
8
January, 2021
1
January, 2018
Available data
28
bigWig
27
bam
27
bed narrowPeak
27
bigBed narrowPeak
27
fastq
Organism
36
Homo sapiens
Biosample type
28
cell line
8
primary cell
Organ
904
pancreas
723
liver
656
connective tissue
502
epithelium
484
adipose tissue
363
heart
276
kidney
251
brain
223
vasculature
219
blood vessel
159
bone element
137
artery
86
limb
62
musculature of body
57
eye
41
nerve
36
blood
36
bodily fluid
34
embryo
20
vein
19
lung
16
skeleton
9
spleen
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
28
AMP
8
T1D
Genome assembly (visualization)
28
hg19
27
GRCh38
Lab
28
AMP-T2D consortium
8
Kyle Gaulton, UCSD
Audit category:
1
inconsistent control
files.file_type!
bed bed3+
month_released!
January, 2019
November, 2018
BIOSAMPLE
ASSAY
36 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
snATAC-seq
ATAC-seq
cell line
GM12878
27
1
primary cell
peripheral blood mononuclear cell
8
Download