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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
ATAC-seq
5
total RNA-seq
3
ChIP-seq
1
RRBS
Assay category
27
DNA accessibility
5
Transcription
3
DNA binding
1
DNA methylation
Target of assay
1
RNA binding protein
1
control
1
histone
1
histone modification
1
narrow histone mark
1
transcription factor
Date released
31
February, 2023
October, 2019
3
June, 2019
1
February, 2020
1
July, 2019
Available data
33
bed narrowPeak
7
bam
6
bigBed narrowPeak
6
bigWig
5
tsv
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
36
Homo sapiens
Biosample type
32
tissue
4
primary cell
Organ
901
pancreas
771
liver
653
connective tissue
484
adipose tissue
470
epithelium
355
heart
246
kidney
180
vasculature
176
blood vessel
165
brain
159
bone element
113
artery
69
blood
69
bodily fluid
62
musculature of body
36
eye
34
embryo
24
spleen
21
limb
20
lung
16
skeleton
2
intestine
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
nerve
1
ovary
1
small intestine
spinal cord
1
stomach
1
urinary bladder
1
vein
Project
36
AMP
Genome assembly (visualization)
30
hg19
2
GRCh38
Lab
36
AMP-T2D consortium
files.file_type!
bed bed3+
month_released!
October, 2019
organ_slims!
pericardium
spinal cord
BIOSAMPLE
ASSAY
36 results
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ATAC-seq
total RNA-seq
ChIP-seq
RRBS
tissue
retina
15
3
pigmented layer of retina
12
2
primary cell
retinal pigment epithelial cell
3
1
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