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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
82
ChIP-seq
6
WGBS
1
ATAC-seq
1
DNase-seq
Assay category
82
DNA binding
6
DNA methylation
2
DNA accessibility
Target of assay
69
histone
69
histone modification
40
broad histone mark
28
narrow histone mark
transcription factor
13
control
4
RNA binding protein
2
chromatin remodeller
Date released
454
February, 2021
90
August, 2017
18
October, 2018
17
July, 2019
11
June, 2019
February, 2023
5
November, 2020
4
October, 2019
3
August, 2021
2
April, 2018
2
February, 2020
2
July, 2018
2
March, 2020
2
May, 2021
1
August, 2018
1
January, 2018
1
May, 2023
1
November, 2019
1
October, 2017
Available data
38
fastq
37
bam
31
bigWig
29
bed narrowPeak
22
tagAlign
3
bigBed narrowPeak
2
bed bedMethyl
2
bed broadPeak
2
bigBed bedMethyl
bed bed3+
1
bigBed broadPeak
Organism
90
Homo sapiens
Biosample type
45
in vitro differentiated cells
45
tissue
Organ
169
pancreas
90
connective tissue
49
liver
45
adipose tissue
29
epithelium
26
musculature of body
Project
90
AMP
Genome assembly (visualization)
30
GRCh38
29
hg19
Lab
90
AMP-T2D consortium
files.file_type!
bed bed3+
month_released!
February, 2023
target.investigated_as!
transcription factor
BIOSAMPLE
ASSAY
90 results
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Clear Filters
ChIP-seq
WGBS
ATAC-seq
DNase-seq
in vitro differentiated cells
adipocyte
44
1
tissue
subcutaneous abdominal adipose tissue
36
3
adipose tissue
2
3
subcutaneous adipose tissue
1
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