Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
106
ChIP-seq
6
WGBS
1
ATAC-seq
1
DNase-seq
Assay category
106
DNA binding
6
DNA methylation
2
DNA accessibility
Target of assay
69
histone
69
histone modification
40
broad histone mark
28
narrow histone mark
24
transcription factor
13
control
4
RNA binding protein
2
chromatin remodeller
Date released
454
February, 2021
114
August, 2017
23
October, 2018
17
July, 2019
12
June, 2019
10
February, 2023
5
November, 2020
4
October, 2019
3
August, 2021
2
April, 2018
2
February, 2020
2
July, 2018
2
March, 2020
2
May, 2021
1
August, 2018
1
January, 2018
1
May, 2023
1
November, 2019
1
October, 2017
Available data
72
fastq
71
bam
65
bigWig
46
bed narrowPeak
22
tagAlign
bed bed3+
3
bigBed narrowPeak
2
bed bedMethyl
2
bed broadPeak
2
bigBed bedMethyl
1
bigBed broadPeak
Organism
114
Homo sapiens
Biosample type
61
in vitro differentiated cells
53
tissue
Organ
169
pancreas
114
connective tissue
53
adipose tissue
51
liver
epithelium
26
musculature of body
Project
114
AMP
Genome assembly (visualization)
54
GRCh38
53
hg19
Lab
114
AMP-T2D consortium
Audit category:
13
missing controlled_by
Audit category:
2
inconsistent control read length
files.file_type!
bed bed3+
organ_slims!
epithelium
kidney
BIOSAMPLE
ASSAY
114 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
WGBS
ATAC-seq
DNase-seq
in vitro differentiated cells
adipocyte
60
1
tissue
subcutaneous abdominal adipose tissue
36
3
white adipose tissue
8
adipose tissue
2
3
subcutaneous adipose tissue
1
Download