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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
124
total RNA-seq
48
single cell RNA-seq
10
MeRIP-seq
1
ATAC-seq
Assay category
172
Transcription
1
DNA accessibility
Target of assay
5
control
5
nucleotide modification
Date released
713
February, 2021
368
November, 2017
333
May, 2021
314
May, 2020
305
August, 2021
296
August, 2017
201
February, 2023
199
May, 2022
168
July, 2018
165
October, 2019
104
July, 2019
86
May, 2019
79
November, 2018
68
December, 2017
65
October, 2018
61
March, 2020
59
September, 2020
58
September, 2018
57
April, 2019
57
November, 2019
49
April, 2018
47
September, 2023
35
December, 2018
31
February, 2018
27
January, 2019
25
February, 2020
25
May, 2024
21
October, 2017
20
June, 2019
19
April, 2020
16
January, 2021
15
May, 2023
15
November, 2020
10
December, 2019
9
September, 2017
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
170
bam
169
bigWig
168
tsv
50
fastq
2
bed narrowPeak
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
bigBed narrowPeak
Organism
183
Homo sapiens
Biosample type
124
tissue
53
primary cell
6
cell line
Organ
167
pancreas
39
epithelium
7
connective tissue
Project
183
AMP
Genome assembly (visualization)
169
GRCh38
169
hg19
Lab
173
AMP-T2D consortium
10
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
12
inconsistent ontology term
files.file_type!
bed bed3+
target.investigated_as!
narrow histone mark
BIOSAMPLE
ASSAY
183 results
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Clear Filters
total RNA-seq
single cell RNA-seq
MeRIP-seq
ATAC-seq
tissue
islet of Langerhans
120
4
primary cell
pancreatic beta cell
9
pancreatic alpha cell
7
osteoblast
4
1
pancreatic acinar cell
5
pancreatic delta cell
4
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cell line
EndoC_BH1
6
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