Home
    • Project overview
    • Policies
    • News
    • Contact
    • Experiments
    • Annotations
    • Single Cell Embeddings
    • Statistical Models
    • Gene Perturbations
    • Data Standards & QC
    • Pipelines
    • Consortia
    • Publications
    • Single Cell Browser
    • Getting started
    • Schema

Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2638pQTL
  • 827chromatin state
  • 487gene expression
  • 116differential activity
  • 84Fine-mapped variants
  • 56eQTL
  • 12variant allelic effects
  • 9accessible chromatin
  • 6sQTL
  • 2hQTL
  • 2variant to gene
  • 1histone modifications
  • 1meQTL
  • 1other
  • 1representative DNase hypersensitivity sites
Date released
  • 2639February, 2025
  • 758September, 2022
  • 141September, 2023
  • 104May, 2021
  • 85February, 2021
  • 85February, 2024
  • 80March, 2020
  • 70March, 2023
  • 54February, 2020
  • 47August, 2021
  • 38March, 2025
  • 34May, 2022
  • 28March, 2024
  • 23January, 2020
  • 15May, 2020
  • 9August, 2018
  • 8May, 2019
  • 6April, 2019
  • 5October, 2019
  • 3November, 2022
  • 2January, 2018
  • 2January, 2025
  • 2May, 2024
  • 1August, 2017
  • 1February, 2023
  • 1July, 2020
  • 1November, 2019
  • 1November, 2020
Available data
  • bed bed3+
  • 3325tsv
  • 792bed bed9
  • 510bigWig
  • 38bigBed bed9
  • 34bed bed9+
  • 26csv
  • 21txt
  • 16bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 4241Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 758EpiMap
  • 149GTEx
  • 141KPMP
  • 123DGA
  • 121AMP
  • 103T1D
  • 81BLUEPRINT
  • 64 T2DKP
  • 55HPAP
  • 43STARNET
  • 24ENCODE
  • 23CMDGA
  • 12T2DKP
Biosample type
  • 3322tissue
  • 591primary cell
  • 207cell line
  • 123in vitro differentiated cells
Organ
  • 2744vasculature
  • 2722blood vessel
  • 2667bodily fluid
  • 2665blood
  • 2641vein
  • 401epithelium
  • kidney
  • 141brain
  • 133connective tissue
  • 106pancreas
  • 96musculature of body
  • 79heart
  • 71lung
  • 67limb
  • 58intestine
  • 55liver
  • 44adipose tissue
  • 37embryo
  • 36skin of body
  • 35large intestine
  • 33extraembryonic component
  • 30artery
  • 25stomach
  • 19bone element
  • 19small intestine
  • 16placenta
  • 15adrenal gland
  • 14mammary gland
  • 14prostate gland
  • 13spinal cord
  • 13ureter
  • 11thymus
  • 10eye
  • 10gonad
  • 10nerve
  • 10penis
  • 9esophagus
  • 8lymph node
  • 7lymphatic vessel
  • 7spleen
  • 6lymphoid tissue
  • 6uterus
  • 5mouth
  • 5ovary
  • 5testis
  • 5thyroid gland
  • 3breast
  • 3skeleton
  • 3tongue
  • 3urinary bladder
  • 3vagina
  • 2bone marrow
  • 2bronchus
  • 1nose
  • 1pericardium
  • 1pituitary gland
Project
  • 4085AMP
  • 141KPMP
  • 13community
  • 4ITG
Genome assembly (visualization)
  • 951hg19
  • 892GRCh38
  • 3hg18
files.file_type!
  • bed bed3+
organ_slims!
  • kidney
BIOSAMPLE
TYPE

4243 results

search-icontable-tab-icon
Clear Filters
pQTL
chromatin state
gene expression
differential activity
Fine-mapped variants
eQTL
variant allelic effects
accessible chromatin
sQTL
hQTL
variant to gene
histone modifications
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart213
stomach191
brain181
islet of Langerhans112112
primary cell
monocyte15111
hepatocyte113
common myeloid progenitor, CD34-positive13
B cell82
T-helper 1 cell37
cell line
A54918
EndoC_BH183
H1-hESC18
induced pluripotent stem cell7
K5626
in vitro differentiated cells
neural progenitor cell471
cardiomyocytes11
hematopoietic multipotent progenitor cell101
extended pluripotent stem (EPS) cells9
induced pluripotent stem cell9
  • Contact
  • Terms of Use
  • AMP Consortium sign-in

©2025 Regents of the University of California.

  • UC San Diego