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Experiment Matrix

Click or enter search terms to filter the experiments included in the matrix.

Assay
  • 56total RNA-seq
  • 45ATAC-seq
  • 34ChIP-seq
  • 2single cell RNA-seq
Assay category
  • 58Transcription
  • 45DNA accessibility
  • 34DNA binding
Target of assay
  • 20histone
  • 20histone modification
  • 14broad histone mark
  • 9control
  • 6narrow histone mark
  • 5transcription factor
  • 1RNA binding protein
Date released
  • 66February, 2021
  • 35February, 2023
  • 24October, 2019
  • 5May, 2019
  • 3July, 2019
  • 2August, 2021
  • 2February, 2020
Available data
  • 102bam
  • 85bigWig
  • 74bed narrowPeak
  • 58tsv
  • 25bigBed narrowPeak
  • 6tagAlign
  • bed bed3+
  • 4bed broadPeak
  • 4bigBed broadPeak
Organism
  • 137Homo sapiens
Biosample type
  • 69tissue
  • 66cell line
  • 2primary cell
Organ
  • 917pancreas
  • 778liver
  • 657connective tissue
  • 503epithelium
  • 485adipose tissue
  • 363heart
  • 276kidney
  • 251brain
  • 223vasculature
  • 219blood vessel
  • 159bone element
  • 137artery
  • 86limb
  • 69blood
  • 69bodily fluid
  • 62musculature of body
  • 57eye
  • 41nerve
  • 34embryo
  • 24spleen
  • 20lung
  • 20vein
  • 16skeleton
  • 5gonad
  • 5ovary
  • 2intestine
  • 2pericardium
  • 2pituitary gland
  • 2thymus
  • 1adrenal gland
  • 1bone marrow
  • 1esophagus
  • 1large intestine
  • 1lymph node
  • 1mammary gland
  • 1skin of body
  • 1small intestine
  • 1spinal cord
  • 1stomach
  • 1urinary bladder
Project
  • 137AMP
Genome assembly (visualization)
  • 124GRCh38
  • 89hg19
Lab
  • 137AMP-T2D consortium
files.file_type!
  • bed bed3+
BIOSAMPLE
ASSAY

137 results

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Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
single cell RNA-seq
tissue
coronary artery1365
tibial artery1123
pulmonary artery2
cell line
smooth muscle cell of the coronary artery5286
primary cell
endothelial cell of coronary artery1
smooth muscle cell of the coronary artery1
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