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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
115
ChIP-seq
Assay category
115
DNA binding
Target of assay
387
transcription factor
113
control
101
histone modification
100
histone
82
recombinant protein
68
RNA binding protein
59
narrow histone mark
41
broad histone mark
33
chromatin remodeller
2
other context
2
other post-translational modification
Date released
58
November, 2017
23
May, 2020
13
December, 2017
10
August, 2017
5
August, 2021
3
January, 2019
3
November, 2018
Available data
109
bam
85
fastq
28
tagAlign
15
bigWig
2
bed narrowPeak
2
bigBed narrowPeak
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
Organism
115
Homo sapiens
Biosample type
68
cell line
45
tissue
1
in vitro differentiated cells
1
primary cell
Organ
109
liver
51
pancreas
34
connective tissue
31
brain
30
epithelium
24
adipose tissue
22
vasculature
21
blood vessel
20
heart
17
limb
12
kidney
11
nerve
11
spleen
9
artery
6
blood
6
bodily fluid
6
embryo
6
musculature of body
2
vein
1
eye
Project
115
AMP
Genome assembly (visualization)
15
hg19
2
GRCh38
Lab
111
AMP-T2D consortium
4
Bing Ren, UCSD
files.file_type!
bed bed3+
BIOSAMPLE
ASSAY
115 results
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Clear Filters
ChIP-seq
cell line
HepG2
62
GM12878
6
tissue
liver
42
right lobe of liver
3
in vitro differentiated cells
hepatocyte
1
primary cell
hepatocyte
1
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