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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
35
ChIP-seq
Assay category
35
DNA binding
Target of assay
84
histone
84
histone modification
48
broad histone mark
42
control
36
transcription factor
35
narrow histone mark
10
RNA binding protein
3
other context
3
other post-translational modification
2
chromatin remodeller
Date released
28
August, 2017
4
June, 2019
2
January, 2019
1
October, 2019
Available data
20
bed narrowPeak
20
bigWig
19
bam
15
fastq
7
bigBed narrowPeak
7
tagAlign
1
bed broadPeak
Organism
35
Homo sapiens
Biosample type
16
in vitro differentiated cells
15
tissue
4
primary cell
Organ
117
brain
67
pancreas
58
liver
47
epithelium
40
heart
33
connective tissue
26
vasculature
25
blood vessel
15
kidney
15
limb
13
musculature of body
12
adipose tissue
8
nerve
embryo
6
artery
6
vein
4
gonad
4
ovary
3
eye
2
spleen
1
blood
1
bodily fluid
1
lymph node
1
pituitary gland
Project
35
AMP
Genome assembly (visualization)
20
hg19
19
GRCh38
Lab
35
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
files.file_type!
bed bed3+
organ_slims!
embryo
BIOSAMPLE
ASSAY
35 results
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ChIP-seq
in vitro differentiated cells
adipocyte
16
tissue
subcutaneous abdominal adipose tissue
11
spleen
2
adipose tissue
1
islet of Langerhans
1
primary cell
cardiac fibroblast
2
mesenchymal stem cell
2
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