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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
5
MeRIP-seq
4
total RNA-seq
1
ATAC-seq
Assay category
4
Transcription
1
DNA accessibility
Target of assay
control
5
nucleotide modification
Date released
708
February, 2021
388
May, 2021
335
November, 2017
330
August, 2017
318
May, 2020
302
August, 2021
267
October, 2019
199
May, 2022
191
February, 2023
168
July, 2018
101
July, 2019
97
May, 2019
73
November, 2018
73
September, 2018
66
April, 2019
64
March, 2020
63
December, 2017
59
November, 2019
59
September, 2020
49
April, 2018
47
October, 2018
47
September, 2023
40
May, 2024
31
December, 2018
31
February, 2018
26
January, 2019
25
February, 2020
23
June, 2019
20
October, 2017
19
April, 2020
16
January, 2021
15
May, 2023
10
December, 2019
10
November, 2020
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
5
September, 2017
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
6
bam
5
bigWig
4
tsv
2
bed narrowPeak
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
bigBed narrowPeak
Organism
10
Homo sapiens
Biosample type
5
primary cell
3
cell line
2
tissue
Organ
5
connective tissue
5
pancreas
3
epithelium
Project
10
AMP
Genome assembly (visualization)
5
GRCh38
5
hg19
Lab
5
AMP-T2D consortium
5
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
3
inconsistent ontology term
files.file_type!
bed bed3
bed bed3+
hdf5
target.investigated_as!
control
BIOSAMPLE
ASSAY
10 results
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Clear Filters
MeRIP-seq
total RNA-seq
ATAC-seq
primary cell
osteoblast
4
1
cell line
EndoC_BH1
3
tissue
islet of Langerhans
2
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