Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
26
total RNA-seq
6
ChIP-seq
3
Hi-C
1
MPRA
1
single cell RNA-seq
Assay category
27
Transcription
6
DNA binding
3
3D chromatin structure
Target of assay
6
control
Date released
692
February, 2021
314
May, 2020
269
August, 2017
266
May, 2021
213
August, 2021
168
July, 2018
162
May, 2022
130
February, 2023
125
October, 2019
101
July, 2019
93
November, 2017
61
March, 2020
59
September, 2020
49
April, 2018
47
September, 2023
31
October, 2018
27
September, 2018
25
February, 2020
24
November, 2019
23
February, 2018
23
May, 2019
22
December, 2017
19
April, 2020
16
January, 2021
15
April, 2019
15
May, 2023
15
November, 2018
14
November, 2020
11
October, 2017
10
December, 2019
9
January, 2019
8
January, 2018
8
June, 2019
7
August, 2020
6
September, 2017
5
December, 2018
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
84
fastq
83
bam
77
bigWig
bed narrowPeak
26
tsv
19
bigBed narrowPeak
3
bedpe bed3+
3
cool
3
hic
2
bed bed3+
1
csv
1
txt
Organism
36
Homo sapiens
Biosample type
30
primary cell
6
tissue
1
cell line
Organ
35
pancreas
29
epithelium
Project
34
AMP
3
HPAP
Genome assembly (visualization)
31
hg19
28
GRCh38
Lab
34
AMP-T2D consortium
3
Klaus Kaestner, Upenn
Audit category:
3
audit script error
files.file_type!
bed bed3
bed narrowPeak
BIOSAMPLE
ASSAY
37 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ChIP-seq
Hi-C
MPRA
single cell RNA-seq
primary cell
pancreatic alpha cell
10
1
pancreatic beta cell
10
1
pancreatic ductal cell
4
pancreatic acinar cell
2
1
pancreatic cell
1
tissue
islet of Langerhans
6
cell line
MIN6
1
Download