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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
ATAC-seq
5
total RNA-seq
4
DNase-seq
2
ChIP-seq
1
RRBS
Assay category
31
DNA accessibility
5
Transcription
2
DNA binding
1
DNA methylation
Target of assay
1
RNA binding protein
1
control
1
histone
1
histone modification
1
narrow histone mark
transcription factor
Date released
31
February, 2023
October, 2019
6
June, 2019
1
February, 2020
1
July, 2019
Available data
32
bed narrowPeak
6
bam
5
bigBed narrowPeak
5
bigWig
5
tsv
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
39
Homo sapiens
Biosample type
35
tissue
4
primary cell
Organ
909
pancreas
634
connective tissue
480
epithelium
473
adipose tissue
445
liver
316
heart
299
kidney
196
brain
180
vasculature
175
blood vessel
155
bone element
110
artery
96
musculature of body
53
limb
39
eye
34
embryo
20
lung
19
spleen
18
blood
18
bodily fluid
18
ureter
12
skeleton
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
nerve
1
ovary
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
1
vein
Project
39
AMP
Genome assembly (visualization)
33
hg19
5
GRCh38
Lab
39
AMP-T2D consortium
files.file_type!
bed bed3
month_released!
April, 2019
October, 2019
target.investigated_as!
transcription factor
BIOSAMPLE
ASSAY
39 results
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ATAC-seq
total RNA-seq
DNase-seq
ChIP-seq
RRBS
tissue
retina
15
3
3
pigmented layer of retina
12
2
primary cell
retinal pigment epithelial cell
1
2
1
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