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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2844target gene predictions
  • 2638pQTL
  • 1707candidate regulatory elements
  • 1187accessible chromatin
  • 977histone modifications
  • 939chromatin state
  • 811binding sites
  • 611gene expression
  • 484differential activity
  • 173eQTL
  • 85variant allelic effects
  • 74Fine-mapped variants
  • 25caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2636February, 2025
  • 2590February, 2021
  • 2511September, 2022
  • 1984July, 2026
  • 389May, 2021
  • February, 2024
  • 333November, 2021
  • 320May, 2026
  • 289June, 2020
  • 286September, 2023
  • 155May, 2020
  • 128August, 2021
  • 128March, 2020
  • 106January, 2022
  • 101October, 2022
  • 89January, 2020
  • 70March, 2023
  • 64February, 2020
  • 56January, 2021
  • 49May, 2022
  • 44November, 2022
  • 40May, 2024
  • 35August, 2017
  • 32February, 2023
  • 30March, 2024
  • 21July, 2025
  • 19April, 2020
  • 14November, 2019
  • 14October, 2019
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 4March, 2026
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 2January, 2025
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 7775bed bed3+
  • 3489tsv
  • 869bed bed9
  • 508bigWig
  • 112txt
  • 40bigBed bed9
  • 34bed bed9+
  • bed bed3
  • 12bed narrowPeak
  • 5bigBed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
  • 2csv
Organism
  • 12530Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 2498EpiMap
  • 1848ChIP-Atlas
  • 1458ENCODE-rE2G
  • 965ENCODE
  • 535DGA
  • 495AMP
  • 395T1D
  • 394T2DKP
  • 393HDMA
  • 320pyxis
  • 281KPMP
  • 194BLUEPRINT
  • 151GTEx
  • 136 T2DKP
  • 133CATlas
  • 111T2D
  • 101eQTLCatalogue
  • 93CMDGA
  • 55HPAP
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 5930tissue
  • 3769primary cell
  • 2391cell line
  • 482in vitro differentiated cells
  • 4stem cell
Organ
  • 3337blood
  • 2886vasculature
  • 2847blood vessel
  • 2825bodily fluid
  • 2659vein
  • 902brain
  • 875epithelium
  • 755kidney
  • 501connective tissue
  • 483heart
  • 439lung
  • 368musculature of body
  • 352intestine
  • 295skin of body
  • 294pancreas
  • 244limb
  • 223large intestine
  • 212liver
  • 174extraembryonic component
  • 164embryo
  • 160eye
  • 142adipose tissue
  • 138stomach
  • 111muscle organ
  • 106bone element
  • 103mammary gland
  • 101adrenal gland
  • 97placenta
  • 97small intestine
  • 93thymus
  • 88artery
  • 86prostate gland
  • 73ureter
  • 64gonad
  • 64penis
  • 63spleen
  • 62lymph node
  • 60__MARKER__
  • 49spinal cord
  • 46esophagus
  • 46thyroid gland
  • 42uterus
  • 32ovary
  • 31testis
  • 25nerve
  • 24skeleton
  • 23lymphoid tissue
  • 21lymphatic vessel
  • 21mouth
  • 15breast
  • 15bronchus
  • 13bone marrow
  • 13pituitary gland
  • 13urinary bladder
  • 12tongue
  • 12vagina
  • 5trachea
  • 4nose
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 11864AMP
  • 333ENCODE
  • 281KPMP
  • 59T1D
  • 19LungMap
  • 17community
  • 5ITG
Genome assembly (visualization)
  • 6695hg19
  • 3677GRCh38
  • 4hg18
files.file_type!
  • bed bed3
month_released!
  • February, 2024
BIOSAMPLE
TYPE

12578 results

search-icontable-tab-icon
Clear Filters
target gene predictions
pQTL
candidate regulatory elements
accessible chromatin
histone modifications
chromatin state
binding sites
gene expression
differential activity
eQTL
variant allelic effects
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart383751211412
stomach4240311911
kidney2829102161711
brain302923181121
primary cell
monocyte2188611544121
fibroblast283401102
endothelial cell173221282513
CD8-positive, alpha-beta T cell27743013
T-cell644
cell line
A549332111182
MCF-71391253
K5621471172
EndoC_BH11811831
HCT1161721
in vitro differentiated cells
hematopoietic multipotent progenitor cell2219111011
neural progenitor cell65101547
adipocyte7431611
embryonic stem cell16151
mesenchymal stem cell431121
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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