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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
84
RNA microarray
62
total RNA-seq
8
ATAC-seq
1
pCHi-C
Assay category
62
Transcription
8
DNA accessibility
Date released
150
February, 2021
4
February, 2023
1
May, 2021
Available data
88
txt
66
bam
58
bigWig
58
tsv
8
bed narrowPeak
bed bed3
Organism
155
Homo sapiens
Biosample type
154
tissue
1
primary cell
Organ
932
pancreas
732
liver
668
connective tissue
516
epithelium
486
adipose tissue
382
heart
351
kidney
282
brain
231
vasculature
226
blood vessel
155
bone element
140
artery
122
limb
96
musculature of body
60
eye
59
blood
59
bodily fluid
43
nerve
37
embryo
25
spleen
22
vein
20
lung
18
ureter
12
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
stomach
1
urinary bladder
Project
154
AMP
1
T1D
Genome assembly (visualization)
66
GRCh38
66
hg19
Lab
154
AMP-T2D consortium
1
Kyle Gaulton, UCSD
Audit category:
84
inconsistent ontology term
files.file_type!
bed bed3
month_released!
March, 2019
organ_slims!
stomach
target.investigated_as!
RNA binding protein
BIOSAMPLE
ASSAY
155 results
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RNA microarray
total RNA-seq
ATAC-seq
pCHi-C
tissue
bone element
84
bone tissue
58
acetabular part of hip bone
1
distal epiphysis
1
distal epiphysis of femur
1
+ See 9 more…
primary cell
megakaryocyte
1
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