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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
34
ChIP-seq
5
GRO-seq
3
ATAC-seq
1
Hi-C
Assay category
34
DNA binding
3
DNA accessibility
1
3D chromatin structure
Target of assay
28
transcription factor
4
control
2
RNA binding protein
2
chromatin remodeller
Date released
707
February, 2021
411
August, 2017
406
November, 2017
399
May, 2021
341
May, 2020
319
August, 2021
245
October, 2019
200
May, 2022
195
February, 2023
186
June, 2019
168
July, 2018
113
May, 2019
103
July, 2019
94
December, 2017
88
November, 2018
80
April, 2019
76
October, 2018
73
September, 2018
64
March, 2020
61
November, 2019
59
September, 2020
49
April, 2018
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
23
October, 2017
22
February, 2020
19
April, 2020
16
January, 2021
16
November, 2020
15
May, 2023
11
September, 2017
10
December, 2019
8
January, 2018
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
40
fastq
38
bigWig
34
bam
30
bed narrowPeak
30
bigBed narrowPeak
Organism
43
Homo sapiens
Biosample type
29
cell line
9
tissue
4
in vitro differentiated cells
1
stem cell
Organ
28
blood
28
bodily fluid
7
spleen
1
adipose tissue
1
connective tissue
1
embryo
1
liver
1
musculature of body
Project
43
AMP
Genome assembly (visualization)
33
hg19
30
GRCh38
5
hg18
Lab
43
AMP-T2D consortium
Audit category:
1
inconsistent control
files.file_type!
bed bed3
month_released!
August, 2020
organ_slims!
limb
BIOSAMPLE
ASSAY
43 results
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Clear Filters
ChIP-seq
GRO-seq
ATAC-seq
Hi-C
cell line
GM12878
27
1
HepG2
1
tissue
spleen
7
adipose tissue
1
skeletal muscle tissue
1
in vitro differentiated cells
Posterior foregut
1
definitive endodermal cell
1
pancreatic endoderm
1
primitive gut cell
1
stem cell
hESC
1
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