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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2440target gene predictions
  • 1666candidate regulatory elements
  • 1224accessible chromatin
  • 953histone modifications
  • 919chromatin state
  • 772binding sites
  • 684gene expression
  • 484differential activity
  • 178eQTL
  • 141variant allelic effects
  • 74Fine-mapped variants
  • 25caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 3pQTL
  • 1representative DNase hypersensitivity sites
Date released
  • 2520February, 2021
  • 2442September, 2022
  • 1461July, 2026
  • 385May, 2021
  • 345February, 2024
  • 333November, 2021
  • 320May, 2026
  • 286September, 2023
  • 277June, 2020
  • 155May, 2020
  • 128March, 2020
  • 126August, 2021
  • 106January, 2022
  • 89January, 2020
  • 82October, 2022
  • 70March, 2023
  • 64February, 2020
  • 56January, 2021
  • 49May, 2022
  • 44November, 2022
  • 40May, 2024
  • 33August, 2017
  • 32February, 2023
  • 29March, 2024
  • 21July, 2025
  • 19April, 2020
  • 14November, 2019
  • 14October, 2019
  • 9August, 2018
  • 9May, 2019
  • 8April, 2019
  • 4March, 2026
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 2January, 2025
  • 1August, 2020
  • 1August, 2022
  • 1February, 2025
  • 1July, 2020
  • 1June, 2021
Available data
  • 7362bed bed3+
  • 915tsv
  • 846bed bed9
  • 546bigWig
  • 112txt
  • 40bigBed bed9
  • 34bed bed9+
  • 26csv
  • 16bigBed narrowPeak
  • bed bed3
  • 12bed narrowPeak
  • 4bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 9538Homo sapiens
Collection Tags
  • 2430EpiMap
  • 1786ChIP-Atlas
  • 935ENCODE-rE2G
  • 927ENCODE
  • 642DGA
  • 532AMP
  • 421T1D
  • 404T2DKP
  • 393HDMA
  • 320pyxis
  • 281KPMP
  • 219BLUEPRINT
  • 174 T2DKP
  • 150GTEx
  • 1464DN
  • 133CATlas
  • 111T2D
  • 101eQTLCatalogue
  • 100CMDGA
  • 67HPAP
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 3455primary cell
  • 3313tissue
  • 2312cell line
  • 500in vitro differentiated cells
  • 4stem cell
Organ
  • blood
  • 2902vasculature
  • 2861blood vessel
  • 2853bodily fluid
  • 2659vein
  • 951epithelium
  • 903brain
  • 756kidney
  • 517connective tissue
  • 488heart
  • 440lung
  • 382musculature of body
  • 358intestine
  • 319pancreas
  • 296skin of body
  • 244limb
  • 240liver
  • 226large intestine
  • 215embryo
  • 174extraembryonic component
  • 161eye
  • 142adipose tissue
  • 140stomach
  • 111muscle organ
  • 106bone element
  • 104mammary gland
  • 102adrenal gland
  • 97placenta
  • 97small intestine
  • 93thymus
  • 93uterus
  • 88artery
  • 87prostate gland
  • 73ureter
  • 64gonad
  • 64penis
  • 63spleen
  • 62lymph node
  • 60__MARKER__
  • 49spinal cord
  • 48esophagus
  • 47thyroid gland
  • 32ovary
  • 31testis
  • 25nerve
  • 24lymphoid tissue
  • 24skeleton
  • 21lymphatic vessel
  • 21mouth
  • 16bronchus
  • 15breast
  • 13bone marrow
  • 13pituitary gland
  • 13urinary bladder
  • 12tongue
  • 12vagina
  • 5trachea
  • 4nose
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 8871AMP
  • 333ENCODE
  • 281KPMP
  • 60T1D
  • 19LungMap
  • 17community
  • 5ITG
Genome assembly (visualization)
  • 6796hg19
  • 3319GRCh38
  • 4hg18
files.file_type!
  • bed bed3
organ_slims!
  • blood
BIOSAMPLE
TYPE

9586 results

search-icontable-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
accessible chromatin
histone modifications
chromatin state
binding sites
gene expression
differential activity
eQTL
variant allelic effects
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
primary cell
monocyte2188611544121
fibroblast2834011026
endothelial cell1732312925223
macrophage13321217832
smooth muscle cell18220117222
tissue
heart383751211412
stomach4240311911
kidney2829102161711
brain302923181121
head of caudate nucleus86
cell line
A549332111182
HeLa-S359531
H1-hESC39111128
MCF-71391253
EndoC_BH11811831
in vitro differentiated cells
neural progenitor cell65101547
hematopoietic multipotent progenitor cell1019111011
adipocyte7441611
embryonic stem cell16151
mesenchymal stem cell431121
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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