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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 3018target gene predictions
  • 2638pQTL
  • 1709candidate regulatory elements
  • 1236accessible chromatin
  • 977histone modifications
  • 726binding sites
  • 685gene expression
  • 484differential activity
  • 180eQTL
  • 141variant allelic effects
  • 74Fine-mapped variants
  • 25caQTL
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2636February, 2025
  • 2590February, 2021
  • 1984July, 2026
  • 1678September, 2022
  • 384May, 2021
  • 368February, 2024
  • 333November, 2021
  • 320May, 2026
  • 289June, 2020
  • 286September, 2023
  • 152May, 2020
  • 128August, 2021
  • 128March, 2020
  • 106January, 2022
  • 83January, 2020
  • 70March, 2023
  • 64February, 2020
  • 56January, 2021
  • 44November, 2022
  • 40May, 2024
  • 32February, 2023
  • 30March, 2024
  • 21July, 2025
  • 19April, 2020
  • 15May, 2022
  • 13November, 2019
  • 10October, 2022
  • 9August, 2018
  • 9October, 2019
  • 4March, 2026
  • 3November, 2020
  • 3September, 2018
  • 2January, 2018
  • 2January, 2025
  • 1August, 2020
  • 1August, 2022
  • 1July, 2020
  • 1June, 2021
Available data
  • 7937bed bed3+
  • 3551tsv
  • 544bigWig
  • 112txt
  • 26csv
  • 16bigBed narrowPeak
  • bed bed3
  • 12bed narrowPeak
  • 3bam
  • 3bed gappedPeak
  • 3xls
Organism
  • 11868Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 1848ChIP-Atlas
  • 1666EpiMap
  • 1458ENCODE-rE2G
  • 875ENCODE
  • 636DGA
  • 533AMP
  • 421T1D
  • 404T2DKP
  • 393HDMA
  • 320pyxis
  • 281KPMP
  • 185BLUEPRINT
  • 174 T2DKP
  • 1744DN
  • 151GTEx
  • 133CATlas
  • 111T2D
  • 101eQTLCatalogue
  • 100CMDGA
  • 67HPAP
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12ROADMAP
Biosample type
  • 5440tissue
  • 3701primary cell
  • 2300cell line
  • 470in vitro differentiated cells
  • 3stem cell
Organ
  • 3321blood
  • 2865vasculature
  • 2831blood vessel
  • 2807bodily fluid
  • 2653vein
  • 893epithelium
  • 825brain
  • 677kidney
  • 458connective tissue
  • 437heart
  • 365lung
  • 307musculature of body
  • 302pancreas
  • 298intestine
  • 257skin of body
  • 222liver
  • 194limb
  • 189large intestine
  • 186embryo
  • 150eye
  • 140extraembryonic component
  • 132adipose tissue
  • 116stomach
  • 111muscle organ
  • 90bone element
  • 88adrenal gland
  • 88uterus
  • 86mammary gland
  • 82thymus
  • 80placenta
  • 79artery
  • 77small intestine
  • 74prostate gland
  • 60__MARKER__
  • 60ureter
  • 57spleen
  • 55gonad
  • 52lymph node
  • 52penis
  • 43thyroid gland
  • 41esophagus
  • 40spinal cord
  • 28ovary
  • 26testis
  • 21nerve
  • 21skeleton
  • 19lymphatic vessel
  • 19lymphoid tissue
  • 17mouth
  • 14bronchus
  • 13breast
  • 13pituitary gland
  • 11bone marrow
  • 11urinary bladder
  • 10tongue
  • 10vagina
  • 5trachea
  • 3nose
  • 1embryonic structure
  • 1gallbladder
  • 1pericardium
Project
  • 11201AMP
  • 333ENCODE
  • 281KPMP
  • 60T1D
  • 19LungMap
  • 17community
  • 5ITG
Genome assembly (visualization)
  • 5967hg19
  • 3024GRCh38
  • 4hg18
files.file_type!
  • bed bed3
software_used.software.name!
  • chromhmm
BIOSAMPLE
TYPE

11916 results

search-icontable-tab-icon
Clear Filters
target gene predictions
pQTL
candidate regulatory elements
accessible chromatin
histone modifications
binding sites
gene expression
differential activity
eQTL
variant allelic effects
Fine-mapped variants
caQTL
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood26351
heart3837511412
stomach42403111
head of caudate nucleus86
kidney28291021711
primary cell
monocyte2188611544121
fibroblast283401026
endothelial cell1732312925223
CD8-positive, alpha-beta T cell2774303
macrophage13321217832
cell line
HeLa-S3595
A5493321111
H1-hESC3911118
K562307111
MCF-7139122
in vitro differentiated cells
hematopoietic multipotent progenitor cell22191111
neural progenitor cell6510157
adipocyte744111
cardiomyocytes11
mesenchymal stem cell43111
stem cell
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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