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Annotation Matrix

Click or enter search terms to filter the experiments included in the matrix.

Annotation type
  • 2637pQTL
  • 2185target gene predictions
  • 1236accessible chromatin
  • 977histone modifications
  • 944chromatin state
  • 876candidate regulatory elements
  • 817binding sites
  • 442differential activity
  • 177eQTL
  • 141variant allelic effects
  • 74Fine-mapped variants
  • 25caQTL
  • 11gene expression
  • 7sQTL
  • 5hQTL
  • 4variant to gene
  • 3meQTL
  • 3other
  • 1representative DNase hypersensitivity sites
Date released
  • 2636February, 2025
  • 2413February, 2021
  • 1984July, 2026
  • 846September, 2022
  • 333November, 2021
  • 320May, 2026
  • 307February, 2024
  • 299May, 2021
  • 289June, 2020
  • 155May, 2020
  • 117March, 2020
  • 115September, 2023
  • 106January, 2022
  • 101October, 2022
  • 75August, 2021
  • 72January, 2020
  • 56January, 2021
  • 49May, 2022
  • 44November, 2022
  • 40May, 2024
  • 35August, 2017
  • 32February, 2023
  • 26February, 2020
  • 21July, 2025
  • 19April, 2020
  • 15March, 2023
  • 14November, 2019
  • 14October, 2019
  • 9May, 2019
  • 8April, 2019
  • 4March, 2026
  • 3September, 2018
  • 2January, 2025
  • 2November, 2020
  • 1August, 2020
  • 1August, 2022
  • 1June, 2021
Available data
  • 6398bed bed3+
  • 2878tsv
  • 869bed bed9
  • 546bigWig
  • 40bigBed bed9
  • 34bed bed9+
  • 16bigBed narrowPeak
  • bed bed3
  • 12bed narrowPeak
  • 4bam
  • 4txt
  • 3bed gappedPeak
  • 3xls
  • 2csv
Organism
  • 10517Homo sapiens
Collection Tags
  • 2635UK_Biobank
  • 1848ChIP-Atlas
  • 1458ENCODE-rE2G
  • 938ENCODE
  • 833EpiMap
  • 438DGA
  • 425AMP
  • 402T2DKP
  • 393HDMA
  • 327T1D
  • 320pyxis
  • 181BLUEPRINT
  • 1744DN
  • 133CATlas
  • 130 T2DKP
  • 111T2D
  • 110KPMP
  • 101eQTLCatalogue
  • 100CMDGA
  • 96GTEx
  • 26FNIH_projects-heart
  • 12FNIH_projects-liver
  • 12HPAP
  • 12ROADMAP
Biosample type
  • 4919tissue
  • 3090primary cell
  • 2180cell line
  • 370in vitro differentiated cells
  • 4stem cell
Organ
  • 3318blood
  • 2819vasculature
  • 2801bodily fluid
  • 2799blood vessel
  • 2654vein
  • 764brain
  • 584epithelium
  • 404kidney
  • 395heart
  • 382connective tissue
  • 299lung
  • 245intestine
  • 235musculature of body
  • 226skin of body
  • 213pancreas
  • 193liver
  • 158large intestine
  • 151embryo
  • 147limb
  • 142eye
  • 113adipose tissue
  • 111muscle organ
  • 108extraembryonic component
  • 92stomach
  • 83uterus
  • 76mammary gland
  • 73adrenal gland
  • 72bone element
  • 71thymus
  • 68artery
  • 65placenta
  • 60__MARKER__
  • 60prostate gland
  • 59small intestine
  • 50spleen
  • 47ureter
  • 46gonad
  • 46lymph node
  • 44penis
  • 38thyroid gland
  • 32esophagus
  • 32spinal cord
  • 23ovary
  • 22testis
  • 17nerve
  • 16skeleton
  • 14lymphatic vessel
  • 13lymphoid tissue
  • 12bronchus
  • 12mouth
  • 12pituitary gland
  • 11bone marrow
  • 10breast
  • 8urinary bladder
  • 7tongue
  • 7vagina
  • 5trachea
  • 2nose
  • 1embryonic structure
  • 1gallbladder
Project
  • 10021AMP
  • 333ENCODE
  • 110KPMP
  • 60T1D
  • 19LungMap
  • 17community
  • 5ITG
Genome assembly (visualization)
  • 5320hg19
  • 3893GRCh38
  • 4hg18
files.file_type!
  • bed bed3
software_used.software.name!
  • r
BIOSAMPLE
TYPE

10565 results

search-icontable-tab-icon
Clear Filters
pQTL
target gene predictions
accessible chromatin
histone modifications
chromatin state
candidate regulatory elements
binding sites
differential activity
eQTL
variant allelic effects
Fine-mapped variants
caQTL
gene expression
sQTL
hQTL
variant to gene
meQTL
other
representative DNase hypersensitivity sites
tissue
whole blood2635
head of caudate nucleus86
heart195121181121
stomach233119211
kidney141021615111
primary cell
monocyte21886144121
fibroblast2840311026
endothelial cell172313225223
CD8-positive, alpha-beta T cell2743017
T-cell644
cell line
HeLa-S356321
H1-hESC381112
A54915111832
K5622411712
MCF-7812543
in vitro differentiated cells
hematopoietic multipotent progenitor cell12111091
neural progenitor cell2101541
adipocyte541621
embryonic stem cell16151
neuronal stem cell21222
stem cell
H1-hESC1
mesenchymal stem cell1
mesendoderm1
undifferentiated ESC (H9 cell line)1
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