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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
971
histone modifications
839
candidate regulatory elements
726
binding sites
636
gene expression
521
target gene predictions
382
accessible chromatin
167
differential activity
145
eQTL
133
variant allelic effects
75
chromatin state
74
Fine-mapped variants
6
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
2576
February, 2021
September, 2022
376
May, 2021
340
February, 2024
289
June, 2020
286
September, 2023
128
March, 2020
111
November, 2021
108
August, 2021
102
January, 2022
102
May, 2020
October, 2022
70
March, 2023
February, 2020
35
August, 2017
33
November, 2022
30
March, 2024
28
January, 2021
24
January, 2020
13
February, 2023
9
August, 2018
8
April, 2019
8
May, 2022
7
May, 2019
5
October, 2019
2
January, 2018
2
May, 2024
2
November, 2019
1
August, 2020
1
August, 2022
1
July, 2020
1
November, 2020
Available data
4144
bed bed3+
853
tsv
bigWig
108
txt
40
bigBed bed9
36
bed bed9
bed bed9+
24
csv
15
bigBed narrowPeak
1
bam
Organism
4696
Homo sapiens
Biosample type
1729
cell line
1503
primary cell
1108
tissue
353
in vitro differentiated cells
4
stem cell
Organ
610
epithelium
380
kidney
264
connective tissue
241
brain
176
pancreas
153
vasculature
146
musculature of body
131
embryo
124
bodily fluid
119
blood
116
blood vessel
114
heart
113
intestine
93
skin of body
88
lung
86
limb
84
liver
72
large intestine
69
uterus
55
adipose tissue
45
stomach
43
extraembryonic component
42
artery
42
eye
39
mammary gland
39
prostate gland
36
lymph node
35
bone element
32
penis
25
adrenal gland
25
small intestine
24
gonad
22
esophagus
22
placenta
22
ureter
17
spinal cord
15
spleen
15
thymus
15
vein
13
pituitary gland
13
testis
12
lymphatic vessel
11
nerve
10
ovary
10
thyroid gland
9
lymphoid tissue
8
bronchus
7
bone marrow
7
breast
7
mouth
5
trachea
4
tongue
4
urinary bladder
4
vagina
1
nose
1
skeleton
Project
4261
AMP
281
KPMP
111
ENCODE
30
T1D
11
community
5
ITG
Genome assembly (visualization)
3762
hg19
624
GRCh38
4
hg18
files.file_type!
bed bed9+
bigWig
month_released!
February, 2020
October, 2022
September, 2022
BIOSAMPLE
TYPE
4699 results
search-icon
table-tab-icon
Clear Filters
histone modifications
candidate regulatory elements
binding sites
gene expression
target gene predictions
accessible chromatin
differential activity
eQTL
variant allelic effects
chromatin state
Fine-mapped variants
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
cell line
HeLa-S3
2
52
H1-hESC
1
1
8
38
1
EndoC_BH1
1
1
8
1
7
3
1
K562
1
1
1
17
1
1
breast cancer cell
11
9
+ See 744 more…
primary cell
monocyte
86
1
15
2
2
4
2
1
1
CD8-positive, alpha-beta T cell
30
7
3
5
endothelial cell
1
2
9
7
2
1
2
1
CD14-positive monocyte
4
15
hepatocyte
4
1
8
2
1
2
+ See 397 more…
tissue
islet of Langerhans
1
2
11
1
2
13
1
3
2
2
2
heart
1
18
1
2
1
2
2
2
kidney
2
15
1
7
1
1
1
1
stomach
1
21
1
2
3
1
liver
2
6
1
3
2
1
7
2
1
+ See 234 more…
in vitro differentiated cells
neural progenitor cell
15
1
7
1
10
adipocyte
1
2
1
1
4
3
4
embryonic stem cell
1
1
1
6
5
hematopoietic multipotent progenitor cell
1
9
1
1
1
cardiomyocytes
11
+ See 118 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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