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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
230
gene expression
110
target gene predictions
93
candidate regulatory elements
81
differential activity
46
accessible chromatin
43
chromatin state
34
variant allelic effects
31
binding sites
25
histone modifications
3
eQTL
2
caQTL
Date released
176
February, 2021
135
September, 2023
126
September, 2022
49
November, 2021
34
March, 2023
33
February, 2024
33
May, 2021
23
June, 2020
15
August, 2021
11
May, 2020
10
January, 2021
10
May, 2024
8
February, 2020
8
November, 2022
6
August, 2018
5
February, 2023
5
March, 2020
5
October, 2022
2
August, 2017
2
March, 2024
1
July, 2020
1
May, 2022
Available data
498
bed bed3+
296
tsv
bigWig
78
txt
41
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
Organism
698
Homo sapiens
Biosample type
595
primary cell
40
tissue
39
cell line
24
in vitro differentiated cells
Organ
783
epithelium
616
kidney
445
brain
413
connective tissue
359
musculature of body
302
lung
278
intestine
238
vasculature
235
heart
230
limb
220
pancreas
218
bodily fluid
213
embryo
207
blood
199
skin of body
blood vessel
171
large intestine
143
extraembryonic component
135
liver
114
stomach
84
adipose tissue
84
mammary gland
82
small intestine
82
uterus
78
bone element
78
prostate gland
73
eye
71
placenta
67
adrenal gland
66
artery
64
penis
62
lymph node
61
ureter
49
gonad
48
thymus
43
esophagus
43
spinal cord
33
spleen
26
testis
24
lymphoid tissue
23
nerve
22
ovary
22
thyroid gland
22
vein
21
lymphatic vessel
19
mouth
14
bronchus
13
breast
13
pituitary gland
10
bone marrow
10
skeleton
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
1
pericardium
Project
502
AMP
135
KPMP
49
ENCODE
10
T1D
2
community
Genome assembly (visualization)
385
hg19
105
GRCh38
files.file_type!
bed bed9+
bigWig
organ_slims!
blood vessel
BIOSAMPLE
TYPE
698 results
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Clear Filters
gene expression
target gene predictions
candidate regulatory elements
differential activity
accessible chromatin
chromatin state
variant allelic effects
binding sites
histone modifications
eQTL
caQTL
primary cell
endothelial cell
9
7
3
2
2
2
1
1
2
epithelial cell of proximal tubule
16
1
2
1
1
1
hepatocyte
8
3
2
1
1
2
1
4
glomerular endothelial cell
14
1
2
1
1
1
foreskin keratinocyte
4
11
4
+ See 119 more…
tissue
breast epithelium
3
5
1
2
esophagus squamous epithelium
2
6
1
2
pigmented layer of retina
7
kidney epithelium
1
1
breast - mammary tissue
1
+ See 8 more…
cell line
EndoC_BH1
8
1
3
7
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
colon epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
+ See 5 more…
in vitro differentiated cells
hepatocyte
1
2
1
retinal pigment epithelial cell
4
foreskin keratinocyte
1
1
1
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
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