Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
58
target gene predictions
9
candidate regulatory elements
4
binding sites
4
chromatin state
3
accessible chromatin
2
gene expression
2
histone modifications
1
eQTL
Date released
51
February, 2024
12
September, 2022
10
February, 2021
2
June, 2020
2
March, 2024
2
May, 2021
2
November, 2021
1
January, 2022
1
October, 2022
Available data
76
bed bed3+
4
bed bed9
2
tsv
1
bigWig
Organism
83
Homo sapiens
Biosample type
65
cell line
13
tissue
5
primary cell
Organ
943
epithelium
649
kidney
451
connective tissue
428
brain
366
musculature of body
310
lung
287
intestine
268
pancreas
254
vasculature
240
heart
235
limb
218
bodily fluid
214
embryo
207
blood
204
skin of body
192
blood vessel
173
large intestine
146
extraembryonic component
146
liver
118
stomach
109
eye
88
bone element
87
mammary gland
83
small intestine
83
uterus
adipose tissue
78
prostate gland
73
placenta
72
adrenal gland
69
artery
64
penis
64
ureter
62
lymph node
49
gonad
thymus
44
esophagus
40
spinal cord
33
spleen
26
testis
24
lymphoid tissue
23
thyroid gland
22
nerve
22
ovary
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
13
breast
13
pituitary gland
12
bone marrow
10
tongue
10
vagina
9
urinary bladder
5
trachea
4
nose
1
pericardium
Project
81
AMP
2
ENCODE
Genome assembly (visualization)
80
hg19
58
GRCh38
files.file_type!
bed bed9+
month_released!
March, 2020
organ_slims!
adipose tissue
thymus
BIOSAMPLE
TYPE
83 results
search-icon
table-tab-icon
Clear Filters
target gene predictions
candidate regulatory elements
binding sites
chromatin state
accessible chromatin
gene expression
histone modifications
eQTL
cell line
HeLa-S3
55
5
1
3
Ishikawa
1
tissue
uterus
2
3
1
1
1
1
endometrium cancer
1
1
cervix - ectocervix
1
endometrium
1
primary cell
Ishikawa
1
1
1
uterine smooth muscle cell
1
1
Download