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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
44
candidate regulatory elements
23
target gene predictions
21
chromatin state
11
binding sites
10
accessible chromatin
8
histone modifications
4
eQTL
3
gene expression
1
variant allelic effects
Date released
63
September, 2022
41
February, 2021
9
June, 2020
4
January, 2022
3
March, 2024
May, 2021
2
November, 2021
1
February, 2024
1
March, 2020
1
October, 2022
Available data
97
bed bed3+
21
bed bed9
3
tsv
1
bigWig
Organism
125
Homo sapiens
Biosample type
59
cell line
53
tissue
13
primary cell
Organ
915
epithelium
652
kidney
455
brain
444
connective tissue
369
musculature of body
307
lung
283
intestine
263
vasculature
251
heart
244
pancreas
241
limb
214
bodily fluid
208
embryo
203
blood
201
blood vessel
199
skin of body
169
large intestine
153
liver
143
extraembryonic component
117
stomach
109
eye
88
bone element
86
adipose tissue
85
mammary gland
small intestine
81
uterus
76
prostate gland
73
artery
72
placenta
71
adrenal gland
64
ureter
63
penis
61
lymph node
49
gonad
48
thymus
45
esophagus
42
spinal cord
33
spleen
26
testis
25
nerve
24
lymphoid tissue
22
ovary
22
thyroid gland
22
vein
21
lymphatic vessel
19
mouth
18
skeleton
16
bronchus
12
bone marrow
12
breast
10
tongue
10
urinary bladder
10
vagina
5
trachea
4
nose
3
pituitary gland
1
pericardium
Project
123
AMP
2
ENCODE
Genome assembly (visualization)
118
hg19
27
GRCh38
files.file_type!
bed bed9+
month_released!
May, 2021
organ_slims!
small intestine
BIOSAMPLE
TYPE
125 results
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candidate regulatory elements
target gene predictions
chromatin state
binding sites
accessible chromatin
histone modifications
eQTL
gene expression
variant allelic effects
cell line
22Rv1
4
2
2
1
1
LNCaP clone FGC
3
2
2
PC-3
2
1
1
1
1
1
RWPE1
2
1
1
1
1
1
NT2-D1 cell
1
1
1
2
1
+ See 7 more…
tissue
ovary
8
5
4
1
1
1
testis
7
3
3
1
1
1
1
1
prostate gland
4
2
2
2
1
2
1
prostate
1
primary cell
epithelial cell of prostate
4
2
2
luteal cell
1
1
Leydig cell
1
luminal epithelial cell of prostatic duct
1
somatic gonadal cell
1
See all biosamples
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