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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1647
candidate regulatory elements
1270
target gene predictions
966
histone modifications
895
accessible chromatin
804
binding sites
671
gene expression
169
eQTL
167
differential activity
138
variant allelic effects
74
chromatin state
71
Fine-mapped variants
13
caQTL
5
hQTL
5
sQTL
4
variant to gene
3
meQTL
3
other
3
pQTL
1
representative DNase hypersensitivity sites
Date released
2534
February, 2021
1615
September, 2022
377
May, 2021
331
November, 2021
327
February, 2024
286
September, 2023
278
June, 2020
150
May, 2020
124
March, 2020
120
August, 2021
105
January, 2022
100
October, 2022
82
January, 2020
70
March, 2023
61
February, 2020
56
January, 2021
49
May, 2022
44
November, 2022
41
May, 2024
34
August, 2017
32
February, 2023
30
March, 2024
19
April, 2020
12
November, 2019
9
August, 2018
9
October, 2019
3
November, 2020
3
September, 2018
2
January, 2018
1
April, 2019
1
August, 2020
1
August, 2022
1
July, 2020
1
June, 2021
Available data
5770
bed bed3+
884
tsv
bed bed9
542
bigWig
108
txt
39
bigBed bed9
34
bed bed9+
24
csv
16
bigBed narrowPeak
4
bam
bed gappedPeak
3
xls
Organism
6861
Homo sapiens
Biosample type
2325
primary cell
2117
tissue
2056
cell line
406
in vitro differentiated cells
3
stem cell
Organ
906
epithelium
575
kidney
427
connective tissue
400
brain
304
musculature of body
261
pancreas
241
lung
237
vasculature
234
intestine
211
heart
194
limb
193
bodily fluid
embryo
184
blood
177
blood vessel
170
skin of body
144
liver
141
large intestine
113
extraembryonic component
100
eye
96
stomach
81
adipose tissue
79
uterus
75
bone element
73
mammary gland
67
artery
65
prostate gland
65
small intestine
59
adrenal gland
57
placenta
54
lymph node
54
penis
51
ureter
42
gonad
38
esophagus
38
thymus
35
spinal cord
28
spleen
22
lymphatic vessel
22
testis
nerve
19
lymphoid tissue
19
ovary
19
thyroid gland
19
vein
15
mouth
15
skeleton
14
bronchus
13
pituitary gland
12
bone marrow
11
breast
8
tongue
8
urinary bladder
8
vagina
5
trachea
3
nose
1
pericardium
Project
6202
AMP
331
ENCODE
281
KPMP
60
T1D
19
LungMap
11
community
5
ITG
Genome assembly (visualization)
5935
hg19
986
GRCh38
4
hg18
files.file_type!
bed bed9
bed gappedPeak
organ_slims!
embryo
nerve
BIOSAMPLE
TYPE
6909 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
gene expression
eQTL
differential activity
variant allelic effects
chromatin state
Fine-mapped variants
caQTL
hQTL
sQTL
variant to gene
meQTL
other
pQTL
representative DNase hypersensitivity sites
primary cell
monocyte
2
86
18
1
15
4
2
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
3
1
endothelial cell
3
7
1
15
2
9
1
2
2
common myeloid progenitor, CD34-positive
27
14
B cell
17
10
6
2
+ See 446 more…
tissue
heart
37
20
1
5
1
3
2
stomach
40
21
1
3
1
1
kidney
29
14
2
10
1
7
1
1
brain
29
16
3
2
1
1
2
1
lung
33
17
1
1
+ See 254 more…
cell line
HeLa-S3
5
55
1
A549
21
19
1
1
2
K562
7
23
1
1
2
1
EndoC_BH1
1
1
8
1
8
3
1
MCF-7
9
6
2
1
3
+ See 746 more…
in vitro differentiated cells
neural progenitor cell
5
5
15
10
7
hematopoietic multipotent progenitor cell
19
10
1
1
1
1
adipocyte
4
6
1
4
1
1
4
cardiomyocytes
11
embryonic stem cell
1
1
6
1
+ See 113 more…
stem cell
mesenchymal stem cell
1
mesendoderm
1
undifferentiated ESC (H9 cell line)
1
See all biosamples
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