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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
162
target gene predictions
136
candidate regulatory elements
59
gene expression
43
binding sites
42
accessible chromatin
35
histone modifications
21
eQTL
14
differential activity
13
variant allelic effects
8
chromatin state
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
159
February, 2021
134
September, 2022
67
February, 2024
29
June, 2020
23
May, 2021
19
August, 2021
18
November, 2021
17
September, 2023
12
October, 2022
10
March, 2020
9
February, 2020
8
August, 2017
7
March, 2023
7
May, 2020
7
November, 2022
6
January, 2022
2
May, 2022
2
May, 2024
1
August, 2018
1
February, 2023
1
January, 2018
1
January, 2020
1
January, 2021
1
November, 2020
Available data
497
bed bed3+
75
tsv
bed bed9
bigWig
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
543
Homo sapiens
Biosample type
222
primary cell
144
cell line
108
tissue
67
in vitro differentiated cells
2
stem cell
Organ
723
epithelium
540
kidney
brain
364
connective tissue
288
musculature of body
232
lung
223
intestine
207
pancreas
204
vasculature
193
bodily fluid
188
heart
186
embryo
184
blood
180
limb
165
skin of body
155
blood vessel
138
large intestine
119
liver
110
extraembryonic component
91
stomach
78
uterus
76
adipose tissue
70
mammary gland
65
bone element
65
prostate gland
64
eye
63
small intestine
59
artery
55
placenta
54
lymph node
54
penis
53
adrenal gland
48
ureter
41
gonad
37
thymus
36
esophagus
35
spinal cord
27
spleen
22
testis
19
lymphoid tissue
19
nerve
18
ovary
18
thyroid gland
18
vein
16
lymphatic vessel
15
mouth
13
pituitary gland
12
bronchus
11
breast
10
bone marrow
8
tongue
8
urinary bladder
8
vagina
7
skeleton
5
trachea
3
nose
1
pericardium
Project
503
AMP
18
ENCODE
15
KPMP
4
ITG
2
community
1
T1D
Genome assembly (visualization)
460
hg19
86
GRCh38
2
hg18
files.file_type!
bed bed9
bigWig
organ_slims!
brain
BIOSAMPLE
TYPE
543 results
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Clear Filters
target gene predictions
candidate regulatory elements
gene expression
binding sites
accessible chromatin
histone modifications
eQTL
differential activity
variant allelic effects
chromatin state
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
4
1
2
2
6
foreskin fibroblast
2
6
4
1
2
trophoblast cell
5
7
1
1
fibroblast of lung
4
6
2
1
osteoblast
2
2
2
3
2
2
+ See 43 more…
cell line
H1-hESC
39
1
8
2
1
1
H9
8
7
GM23248
1
2
1
1
1
HUES8
4
1
1
CyT49
4
1
+ See 25 more…
tissue
adipose tissue
8
7
3
1
1
4
1
subcutaneous adipose tissue
2
5
6
1
1
1
3
omental fat pad
2
5
2
2
3
chorionic villus
4
8
trophoblast
3
4
1
1
+ See 11 more…
in vitro differentiated cells
adipocyte
6
4
1
1
3
1
4
mesenchymal stem cell
3
3
1
1
1
endodermal cell
2
4
mesodermal cell
1
4
1
chondrocyte
5
+ See 14 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
See all biosamples
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