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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
97
candidate regulatory elements
88
target gene predictions
51
gene expression
35
accessible chromatin
31
binding sites
25
histone modifications
24
eQTL
18
variant allelic effects
14
differential activity
7
chromatin state
6
Fine-mapped variants
2
caQTL
2
pQTL
Date released
118
February, 2021
94
September, 2022
22
June, 2020
20
November, 2021
18
February, 2024
17
September, 2023
16
May, 2021
12
October, 2022
11
August, 2021
10
March, 2020
10
May, 2020
9
February, 2020
9
January, 2022
7
August, 2017
7
March, 2023
7
November, 2022
2
March, 2024
2
May, 2022
2
May, 2024
1
August, 2018
1
February, 2023
1
January, 2018
1
January, 2020
1
January, 2021
1
November, 2020
Available data
363
bed bed3+
67
tsv
bigWig
bed bed9
7
txt
2
bigBed bed9
1
bigBed narrowPeak
Organism
400
Homo sapiens
Biosample type
218
primary cell
109
tissue
44
in vitro differentiated cells
28
cell line
1
stem cell
Organ
723
epithelium
540
kidney
379
brain
364
connective tissue
288
musculature of body
232
lung
223
intestine
207
pancreas
204
vasculature
193
bodily fluid
188
heart
186
embryo
184
blood
180
limb
165
skin of body
155
blood vessel
138
large intestine
119
liver
110
extraembryonic component
91
stomach
78
uterus
76
adipose tissue
70
mammary gland
65
bone element
65
prostate gland
64
eye
63
small intestine
59
artery
55
placenta
54
lymph node
54
penis
53
adrenal gland
48
ureter
41
gonad
37
thymus
36
esophagus
35
spinal cord
27
spleen
22
testis
19
lymphoid tissue
19
nerve
18
ovary
18
thyroid gland
18
vein
16
lymphatic vessel
15
mouth
13
pituitary gland
12
bronchus
breast
10
bone marrow
8
tongue
8
urinary bladder
8
vagina
7
skeleton
5
trachea
3
nose
1
pericardium
Project
358
AMP
20
ENCODE
15
KPMP
4
ITG
2
community
1
T1D
Genome assembly (visualization)
322
hg19
40
GRCh38
2
hg18
files.file_type!
bed bed9
bigWig
organ_slims!
breast
BIOSAMPLE
TYPE
400 results
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Clear Filters
candidate regulatory elements
target gene predictions
gene expression
accessible chromatin
binding sites
histone modifications
eQTL
variant allelic effects
differential activity
chromatin state
Fine-mapped variants
caQTL
pQTL
primary cell
fibroblast
4
2
1
2
6
foreskin fibroblast
6
2
1
4
2
fibroblast of lung
6
4
2
1
osteoblast
2
2
2
2
3
2
pericyte cell
1
10
+ See 45 more…
tissue
adipose tissue
7
8
3
1
1
4
1
subcutaneous adipose tissue
2
5
6
1
1
1
3
omental fat pad
5
2
2
2
3
esophagus muscularis mucosa
5
2
1
1
esophagus squamous epithelium
6
2
1
+ See 11 more…
in vitro differentiated cells
adipocyte
4
6
1
3
1
1
4
mesenchymal stem cell
3
3
1
1
1
chondrocyte
5
fibroblast
1
1
Adipose SGBS cell line (adipocyte)
1
+ See 7 more…
cell line
GM23248
2
1
1
1
1
fibroblast of cardiac tissue
2
1
2
HT1080
2
1
adipose tissue derived mesenchymal stem cell
1
1
chondrocyte
1
1
+ See 7 more…
stem cell
mesenchymal stem cell
1
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