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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
244
gene expression
119
target gene predictions
100
candidate regulatory elements
92
differential activity
52
accessible chromatin
43
binding sites
37
variant allelic effects
28
histone modifications
3
chromatin state
3
eQTL
2
caQTL
Date released
193
February, 2021
155
September, 2023
100
September, 2022
49
November, 2021
43
February, 2024
38
March, 2023
34
May, 2021
25
June, 2020
15
August, 2021
14
May, 2020
10
January, 2021
9
February, 2020
8
November, 2022
6
August, 2018
6
March, 2020
6
October, 2022
5
February, 2023
3
August, 2017
2
March, 2024
1
July, 2020
1
May, 2022
Available data
547
bed bed3+
324
tsv
bigWig
78
txt
bed bed9
14
bigBed narrowPeak
6
csv
3
bam
3
bed gappedPeak
3
xls
2
bigBed bed9
Organism
723
Homo sapiens
Biosample type
624
primary cell
40
cell line
36
tissue
23
in vitro differentiated cells
Organ
723
epithelium
540
kidney
379
brain
364
connective tissue
288
musculature of body
232
lung
223
intestine
207
pancreas
204
vasculature
193
bodily fluid
188
heart
186
embryo
184
blood
180
limb
165
skin of body
155
blood vessel
138
large intestine
119
liver
110
extraembryonic component
91
stomach
78
uterus
76
adipose tissue
70
mammary gland
65
bone element
65
prostate gland
64
eye
63
small intestine
59
artery
55
placenta
54
lymph node
54
penis
53
adrenal gland
48
ureter
41
gonad
37
thymus
36
esophagus
35
spinal cord
27
spleen
22
testis
19
lymphoid tissue
19
nerve
18
ovary
18
thyroid gland
18
vein
16
lymphatic vessel
15
mouth
13
pituitary gland
12
bronchus
11
breast
10
bone marrow
8
tongue
8
urinary bladder
vagina
7
skeleton
5
trachea
3
nose
1
pericardium
Project
507
AMP
155
KPMP
49
ENCODE
10
T1D
2
community
Genome assembly (visualization)
383
hg19
65
GRCh38
files.file_type!
bed bed9
bigWig
organ_slims!
vagina
BIOSAMPLE
TYPE
723 results
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Clear Filters
gene expression
target gene predictions
candidate regulatory elements
differential activity
accessible chromatin
binding sites
variant allelic effects
histone modifications
chromatin state
eQTL
caQTL
primary cell
endothelial cell
9
7
2
2
2
1
1
2
epithelial cell of proximal tubule
16
1
2
1
1
hepatocyte
8
3
1
1
1
2
4
glomerular endothelial cell
14
1
2
1
1
endothelial cell of umbilical vein
4
6
1
2
1
1
+ See 133 more…
cell line
EndoC_BH1
8
1
3
7
1
keratinocyte
3
1
choroid plexus epithelial cell
1
1
1
epithelial cell of prostate
1
1
1
colon epithelial cell
1
1
+ See 6 more…
tissue
breast epithelium
3
5
1
esophagus squamous epithelium
2
6
1
pigmented layer of retina
7
kidney epithelium
1
1
breast - mammary tissue
1
+ See 8 more…
in vitro differentiated cells
retinal pigment epithelial cell
4
foreskin keratinocyte
1
1
1
hepatocyte
1
2
hepatocyte(AFP)
3
mammary gland epithelial cell
1
1
1
+ See 4 more…
See all biosamples
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