Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
131
candidate regulatory elements
78
target gene predictions
9
binding sites
6
accessible chromatin
4
histone modifications
1
chromatin state
1
eQTL
1
gene expression
1
variant allelic effects
Date released
140
September, 2022
70
February, 2021
6
June, 2020
4
May, 2021
4
October, 2022
3
November, 2021
1
August, 2017
1
February, 2024
1
January, 2022
1
March, 2020
1
March, 2024
Available data
239
bed bed3+
bed bed9
bigWig
1
tsv
Organism
232
Homo sapiens
Biosample type
138
tissue
73
cell line
21
primary cell
Organ
733
epithelium
540
kidney
379
brain
372
connective tissue
288
musculature of body
232
lung
223
intestine
207
pancreas
207
vasculature
193
bodily fluid
190
heart
186
embryo
184
blood
180
limb
165
skin of body
155
blood vessel
138
large intestine
121
liver
110
extraembryonic component
91
stomach
78
uterus
76
adipose tissue
70
mammary gland
65
bone element
65
prostate gland
64
eye
63
small intestine
59
artery
55
placenta
54
lymph node
54
penis
53
adrenal gland
48
ureter
41
gonad
37
thymus
36
esophagus
35
spinal cord
27
spleen
22
testis
19
lymphatic vessel
19
lymphoid tissue
19
nerve
18
ovary
18
thyroid gland
18
vein
15
mouth
13
pituitary gland
12
bronchus
11
breast
10
bone marrow
8
tongue
8
urinary bladder
vagina
7
skeleton
5
trachea
3
nose
1
pericardium
Project
229
AMP
3
ENCODE
Genome assembly (visualization)
230
hg19
4
GRCh38
files.file_type!
bed bed9
bigWig
organ_slims!
vagina
BIOSAMPLE
TYPE
232 results
search-icon
table-tab-icon
Clear Filters
candidate regulatory elements
target gene predictions
binding sites
accessible chromatin
histone modifications
chromatin state
eQTL
gene expression
variant allelic effects
tissue
lung
33
17
1
1
left lung
26
13
right lung
22
11
1
upper lobe of left lung
7
3
1
1
1
cell line
A549
21
19
2
1
1
IMR-90
2
2
2
1
1
PC-9
2
2
1
1
1
WI38
5
1
NCI-H226 cell
1
1
1
+ See 3 more…
primary cell
fibroblast of lung
6
4
2
1
lung microvascular endothelial cell
3
1
type II pneumocyte
2
1
type I pneumocyte
1
See all biosamples
Download