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Schema
Citing CMDGA
Annotation Matrix
Click or enter search terms to filter the experiments included in the matrix.
Annotation type
1595
candidate regulatory elements
1276
target gene predictions
928
histone modifications
868
accessible chromatin
799
binding sites
127
eQTL
122
variant allelic effects
69
chromatin state
43
gene expression
13
caQTL
9
differential activity
5
hQTL
5
sQTL
3
meQTL
3
other
3
pQTL
2
Fine-mapped variants
2
variant to gene
Date released
2298
February, 2021
1554
September, 2022
331
November, 2021
310
February, 2024
285
May, 2021
267
June, 2020
133
May, 2020
95
October, 2022
88
January, 2022
79
August, 2021
56
January, 2021
49
May, 2022
48
January, 2020
47
March, 2020
44
November, 2022
39
May, 2024
31
February, 2023
29
August, 2017
18
April, 2020
17
February, 2020
13
March, 2023
13
November, 2019
9
August, 2018
9
October, 2019
3
September, 2018
2
November, 2020
September, 2023
1
April, 2019
1
August, 2020
1
August, 2022
1
June, 2021
Available data
5637
bed bed3+
bed bed9
tsv
523
bigWig
108
txt
34
bed bed9+
34
bigBed bed9
24
csv
16
bigBed narrowPeak
4
bam
3
bed gappedPeak
3
xls
Organism
5825
Homo sapiens
Biosample type
2085
cell line
1722
tissue
1710
primary cell
350
in vitro differentiated cells
3
stem cell
Organ
585
epithelium
360
connective tissue
brain
324
kidney
290
musculature of body
240
lung
231
intestine
192
bodily fluid
188
pancreas
183
blood
182
heart
178
embryo
177
limb
173
vasculature
168
skin of body
139
large intestine
130
blood vessel
116
liver
113
extraembryonic component
98
eye
94
stomach
77
uterus
73
mammary gland
71
bone element
65
small intestine
64
prostate gland
59
adipose tissue
58
adrenal gland
57
placenta
54
lymph node
54
penis
51
artery
51
ureter
40
gonad
38
thymus
36
esophagus
30
spinal cord
27
spleen
21
testis
18
lymphoid tissue
18
ovary
18
thyroid gland
18
vein
17
lymphatic vessel
15
nerve
15
skeleton
bronchus
14
mouth
12
bone marrow
12
pituitary gland
10
breast
7
tongue
7
urinary bladder
7
vagina
5
trachea
3
nose
1
pericardium
Project
5449
AMP
331
ENCODE
60
T1D
18
LungMap
9
community
5
ITG
Genome assembly (visualization)
5713
hg19
900
GRCh38
4
hg18
files.file_type!
bed bed9
tsv
month_released!
September, 2023
organ_slims!
brain
bronchus
BIOSAMPLE
TYPE
5872 results
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Clear Filters
candidate regulatory elements
target gene predictions
histone modifications
accessible chromatin
binding sites
eQTL
variant allelic effects
chromatin state
gene expression
caQTL
differential activity
hQTL
sQTL
meQTL
other
pQTL
Fine-mapped variants
variant to gene
cell line
HeLa-S3
5
55
1
A549
21
19
1
1
2
H1-hESC
1
39
1
1
2
K562
7
23
1
1
2
1
MCF-7
9
6
2
1
3
+ See 747 more…
tissue
heart
37
20
1
5
1
2
stomach
40
21
1
3
1
kidney
29
14
2
10
1
1
1
lung
33
17
1
muscle of arm
33
16
1
1
+ See 172 more…
primary cell
monocyte
2
86
18
1
4
2
1
1
CD8-positive, alpha-beta T cell
7
5
30
4
1
common myeloid progenitor, CD34-positive
27
14
endothelial cell
3
7
1
15
2
1
2
1
2
B cell
17
10
6
+ See 335 more…
in vitro differentiated cells
neural progenitor cell
5
5
15
10
hematopoietic multipotent progenitor cell
19
10
1
1
1
adipocyte
4
6
1
4
1
4
embryonic stem cell
1
1
6
1
mesenchymal stem cell
3
3
1
1
1
+ See 101 more…
stem cell
H1-hESC
1
mesenchymal stem cell
1
mesendoderm
1
See all biosamples
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